Guide to the Human Genome
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Name: KNDC1 Sequence: fasta or formatted (1749aa) NCBI GI: 116268127
Description:

kinase non-catalytic C-lobe domain (KIND) containing 1 isoform a

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1        176           3
 C cysteine            2.2         39           1
 D aspartate           5.0         88           2
 E glutamate           7.6        133           3
 F phenylalanine       3.8         66           2
 G glycine             6.3        111           2
 H histidine           1.9         33           2
 I isoleucine          2.3         40           2
 K lysine              4.3         76           2
 L leucine            11.1        195           3
 M methionine          1.3         23           2
 N asparagine          2.2         38           1
 P proline             9.2        161           3
 Q glutamine           5.0         88           2
 R arginine            6.8        119           2
 S serine              8.9        155           3
 T threonine           4.3         75           2
 V valine              4.7         83           2
 W tryptophan          0.8         14           1
 Y tyrosine            2.1         36           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kinase non-catalytic C-lobe domain (KIND) containin... 
PRB2                  0.011   proline-rich protein BstNI subfamily 2 
PRB1                  0.011   proline-rich protein BstNI subfamily 1 isoform 1 pre...
ARHGAP17              0.011   nadrin isoform 1 
PRB3                  0.011   proline-rich protein BstNI subfamily 3 precursor [H...
FLJ22184              0.011   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.011   PREDICTED: hypothetical protein LOC80164 
GLTSCR1               0.011   glioma tumor suppressor candidate region gene 1 [Ho...
ARHGAP17              0.010   nadrin isoform 2 
PCLO                  0.010   piccolo isoform 2 
PCLO                  0.010   piccolo isoform 1 
PRB4                  0.010   proline-rich protein BstNI subfamily 4 precursor [Ho...
FLJ22184              0.010   PREDICTED: hypothetical protein FLJ22184 
RAPGEF5               0.009   Rap guanine nucleotide exchange factor (GEF) 5 [Hom...
OGFR                  0.009   opioid growth factor receptor 
CASKIN1               0.009   CASK interacting protein 1 
COL3A1                0.009   collagen type III alpha 1 preproprotein 
PRB1                  0.009   proline-rich protein BstNI subfamily 1 isoform 2 pre...
RAPGEF4               0.009   Rap guanine nucleotide exchange factor (GEF) 4 isof...
RAPGEF4               0.009   Rap guanine nucleotide exchange factor (GEF) 4 isof...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.009   SWI/SNF-related matrix-associated actin-dependent re...
TAF4                  0.009   TBP-associated factor 4 
ZNF469                0.009   zinc finger protein 469 
SYN1                  0.009   synapsin I isoform Ia 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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