| Name: OTUD1 | Sequence: fasta or formatted (481aa) | NCBI GI: 223941923 | |
|
Description: OTU domain containing 1
|
Referenced in: Ubiquitin and Related Protein Modifications
| ||
|
Composition:
Amino acid Percentage Count Longest homopolymer A alanine 16.0 77 4 C cysteine 2.1 10 1 D aspartate 5.0 24 1 E glutamate 6.9 33 2 F phenylalanine 1.7 8 1 G glycine 8.1 39 2 H histidine 3.3 16 1 I isoleucine 2.9 14 2 K lysine 2.7 13 1 L leucine 7.9 38 3 M methionine 1.5 7 1 N asparagine 1.9 9 1 P proline 11.9 57 2 Q glutamine 3.1 15 1 R arginine 6.4 31 2 S serine 6.9 33 2 T threonine 3.3 16 2 V valine 4.0 19 2 W tryptophan 1.5 7 1 Y tyrosine 3.1 15 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 OTU domain containing 1 OTUD5 0.048 OTU domain containing 5 isoform a OTUD5 0.045 OTU domain containing 5 isoform b OTUD5 0.045 OTU domain containing 5 isoform b NACA 0.039 nascent polypeptide-associated complex alpha subuni... C2orf55 0.038 hypothetical protein LOC343990 KIAA0754 0.036 hypothetical protein LOC643314 UNCX 0.036 UNC homeobox COL1A1 0.035 alpha 1 type I collagen preproprotein TAF4 0.035 TBP-associated factor 4 FLJ22184 0.035 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.032 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.032 PREDICTED: hypothetical protein LOC80164 OTUD5 0.031 OTU domain containing 5 isoform c SETD1A 0.030 SET domain containing 1A OTUD3 0.030 OTU domain containing 3 COL2A1 0.030 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.030 collagen, type II, alpha 1 isoform 2 precursor [Hom... ZFPM1 0.029 zinc finger protein, multitype 1 KRTAP4-6 0.028 PREDICTED: keratin associated protein 4.6 MUC7 0.028 mucin 7, secreted precursor MUC7 0.028 mucin 7, secreted precursor MUC7 0.028 mucin 7, secreted precursor BAT2D1 0.028 HBxAg transactivated protein 2 HIC1 0.027 hypermethylated in cancer 1 isoform 2 HIC1 0.027 hypermethylated in cancer 1 isoform 1 LMTK3 0.027 lemur tyrosine kinase 3 MYO16 0.027 myosin heavy chain Myr 8 LOC731551 0.027 PREDICTED: similar to ectonucleotide pyrophosphatas... LOC650354 0.027 PREDICTED: similar to ectonucleotide pyrophosphatas...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
