Guide to the Human Genome
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Name: IER5L Sequence: fasta or formatted (404aa) NCBI GI: 148727370
Description:

immediate early response 5-like

Referenced in:

Additional Signal Responses

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.8         64           6
 C cysteine            3.7         15           2
 D aspartate           3.7         15           2
 E glutamate           4.2         17           4
 F phenylalanine       2.2          9           1
 G glycine             9.4         38           4
 H histidine           5.0         20           2
 I isoleucine          2.0          8           1
 K lysine              1.7          7           1
 L leucine             9.9         40           2
 M methionine          0.5          2           1
 N asparagine          1.5          6           1
 P proline            12.9         52           3
 Q glutamine           8.4         34           8
 R arginine            5.0         20           2
 S serine              7.4         30           2
 T threonine           2.0          8           2
 V valine              2.0          8           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.5         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   immediate early response 5-like 
IER5                  0.080   immediate early response 5 
SALL3                 0.054   sal-like 3 
ATN1                  0.049   atrophin-1 
ATN1                  0.049   atrophin-1 
NACA                  0.041   nascent polypeptide-associated complex alpha subuni...
FOXL2                 0.041   forkhead box L2 
IQSEC2                0.041   IQ motif and Sec7 domain 2 isoform1 
SFPQ                  0.040   splicing factor proline/glutamine rich (polypyrimidin...
TAF4                  0.039   TBP-associated factor 4 
SAMD1                 0.039   sterile alpha motif domain containing 1 
CDKN1C                0.039   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.039   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.039   cyclin-dependent kinase inhibitor 1C isoform a 
RANBP9                0.039   RAN binding protein 9 
SF3B4                 0.039   splicing factor 3b, subunit 4 
FMN2                  0.039   formin 2 
AMOT                  0.038   angiomotin isoform 2 
AMOT                  0.038   angiomotin isoform 1 
TPRX1                 0.038   tetra-peptide repeat homeobox 
MAPK1IP1L             0.036   MAPK-interacting and spindle-stabilizing protein [Ho...
FOXD2                 0.036   forkhead box D2 
SF3A2                 0.036   splicing factor 3a, subunit 2 
SMARCC1               0.036   SWI/SNF-related matrix-associated actin-dependent r...
IER2                  0.036   immediate early response 2 
YLPM1                 0.035   YLP motif containing 1 
ZFPM1                 0.035   zinc finger protein, multitype 1 
LOC100292589          0.034   PREDICTED: hypothetical protein 
LOC100290121          0.034   PREDICTED: hypothetical protein XP_002346879 
LOC100289406          0.034   PREDICTED: hypothetical protein XP_002342721 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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