Guide to the Human Genome
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Name: LOC100131244 Sequence: fasta or formatted (380aa) NCBI GI: 169208593
Description:

PREDICTED: similar to kinase D-interacting substrate 220

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [380aa] PREDICTED: similar to kinase D-interacting substrate 220
alt mRNA [380aa] PREDICTED: similar to kinase D-interacting substrate 220
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            16.1         61           7
 C cysteine            1.3          5           1
 D aspartate           3.2         12           1
 E glutamate           5.8         22           3
 F phenylalanine       1.8          7           1
 G glycine            11.6         44           2
 H histidine           2.1          8           1
 I isoleucine          1.1          4           2
 K lysine              1.1          4           1
 L leucine            11.8         45           3
 M methionine          1.6          6           1
 N asparagine          2.1          8           1
 P proline             9.2         35           2
 Q glutamine           3.4         13           1
 R arginine           11.6         44           3
 S serine              6.8         26           2
 T threonine           3.4         13           1
 V valine              5.0         19           2
 W tryptophan          1.1          4           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to kinase D-interacting substrat... 
LOC100131244          1.000   PREDICTED: similar to kinase D-interacting substrat...
LOC100131244          0.996   PREDICTED: similar to kinase D-interacting substrat...
ANKRD50               0.072   ankyrin repeat domain 50 
LOC441869             0.071   hypothetical protein LOC441869 
ANKRD28               0.068   ankyrin repeat domain 28 
ANKRD34A              0.067   ankyrin repeat domain 34 
TANC1                 0.067   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.067   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKRD46               0.061   ankyrin repeat domain 46 
ANKDD1A               0.061   ankyrin repeat and death domain containing 1A 
ANKRD54               0.061   ankyrin repeat domain 54 
TANC2                 0.061   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKRD27               0.059   ankyrin repeat domain 27 (VPS9 domain) 
ANKRD29               0.057   ankyrin repeat domain 29 
ANKK1                 0.057   ankyrin repeat and kinase domain containing 1 
ANKRD17               0.057   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.057   ankyrin repeat domain protein 17 isoform b 
ANKRD33B              0.056   PREDICTED: ankyrin repeat domain 33B 
ANKRD33B              0.056   PREDICTED: ankyrin repeat domain 33B 
ANKRD33B              0.056   PREDICTED: ankyrin repeat domain 33B 
ANKHD1                0.056   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.056   ANKHD1-EIF4EBP3 protein 
NOTCH4                0.053   notch4 preproprotein 
CASKIN1               0.053   CASK interacting protein 1 
ESPN                  0.053   espin 
ASZ1                  0.052   ankyrin repeat, SAM and basic leucine zipper domain ...
ANKRD44               0.052   ankyrin repeat domain 44 
ANKRD52               0.052   ankyrin repeat domain 52 
KIDINS220             0.052   kinase D-interacting substrate of 220 kDa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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