Search of human proteins with 169210998

Search of human proteins with 169210998

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169210998 PREDICTED: hypothetical protein [Homo sapiens]
         (107 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169211879 PREDICTED: hypothetical protein [Homo sapiens]           220   2e-58
gi|169210998 PREDICTED: hypothetical protein [Homo sapiens]           220   2e-58
gi|169211412 PREDICTED: hypothetical protein [Homo sapiens]           218   6e-58
gi|19111150 angiomotin isoform 2 [Homo sapiens]                        35   0.013
gi|166064029 angiomotin isoform 1 [Homo sapiens]                       35   0.013
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    31   0.19 
gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]         30   0.42 
gi|15150807 tumor protein p53 inducible nuclear protein 1 isofor...    30   0.42 
gi|116805350 homeo box (H6 family) 1 [Homo sapiens]                    30   0.42 
gi|5902108 SRY-box 21 [Homo sapiens]                                   30   0.42 
gi|239754979 PREDICTED: hypothetical protein [Homo sapiens]            30   0.55 
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]        30   0.55 
gi|122937450 shisa homolog 3 [Homo sapiens]                            29   0.71 
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]      29   0.71 
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [...    29   0.93 
gi|239749065 PREDICTED: hypothetical protein XP_002346903 [Homo ...    29   0.93 
gi|239508743 PREDICTED: hypothetical protein [Homo sapiens]            29   0.93 
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]       29   0.93 
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ...    29   0.93 
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ...    29   0.93 
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [...    29   0.93 
gi|219842244 periphilin 1 isoform 6 [Homo sapiens]                     29   0.93 
gi|48255929 periphilin 1 isoform 1 [Homo sapiens]                      29   0.93 
gi|41872349 periphilin 1 isoform 4 [Homo sapiens]                      29   0.93 
gi|41872344 periphilin 1 isoform 3 [Homo sapiens]                      29   0.93 
gi|41872339 periphilin 1 isoform 5 [Homo sapiens]                      29   0.93 
gi|41872368 periphilin 1 isoform 2 [Homo sapiens]                      29   0.93 
gi|160420328 iron-sulfur cluster assembly 2 [Homo sapiens]             29   0.93 
gi|194363768 homeobox D9 [Homo sapiens]                                28   1.2  
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]     28   1.2  

>gi|169211879 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 107

 Score =  220 bits (560), Expect = 2e-58
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60
           MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH
Sbjct: 1   MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60

Query: 61  VAAAGGVGLEAASSVHVHPWPAGIIAGSATRRKGTDWAPEDWVDIQY 107
           VAAAGGVGLEAASSVHVHPWPAGIIAGSATRRKGTDWAPEDWVDIQY
Sbjct: 61  VAAAGGVGLEAASSVHVHPWPAGIIAGSATRRKGTDWAPEDWVDIQY 107


>gi|169210998 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 107

 Score =  220 bits (560), Expect = 2e-58
 Identities = 107/107 (100%), Positives = 107/107 (100%)

Query: 1   MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60
           MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH
Sbjct: 1   MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60

Query: 61  VAAAGGVGLEAASSVHVHPWPAGIIAGSATRRKGTDWAPEDWVDIQY 107
           VAAAGGVGLEAASSVHVHPWPAGIIAGSATRRKGTDWAPEDWVDIQY
Sbjct: 61  VAAAGGVGLEAASSVHVHPWPAGIIAGSATRRKGTDWAPEDWVDIQY 107


>gi|169211412 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 107

 Score =  218 bits (556), Expect = 6e-58
 Identities = 106/107 (99%), Positives = 107/107 (100%)

Query: 1   MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60
           MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH
Sbjct: 1   MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALH 60

Query: 61  VAAAGGVGLEAASSVHVHPWPAGIIAGSATRRKGTDWAPEDWVDIQY 107
           VAAAGGVGLEAASSVHVHPWPAGIIAGSATR+KGTDWAPEDWVDIQY
Sbjct: 61  VAAAGGVGLEAASSVHVHPWPAGIIAGSATRQKGTDWAPEDWVDIQY 107


>gi|19111150 angiomotin isoform 2 [Homo sapiens]
          Length = 675

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 2/92 (2%)

Query: 9   AALRASRLAPTGAATTTTSVSTSPSATTEM-GWARAARACAGTPPGAQGDALHVAAAGGV 67
           AA  A+  AP+ A    T+ + SP+A  ++   A  A A A  P  A   A+ VA A   
Sbjct: 509 AAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPA 568

Query: 68  GLEAASSVHVHPWPAGIIAGSATRRKGTDWAP 99
            + A + V V P PA   A +  + +    AP
Sbjct: 569 PVPAPALVPV-PAPAAAQASAPAQTQAPTSAP 599



 Score = 33.9 bits (76), Expect = 0.029
 Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 9   AALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAGGVG 68
           AA  A+ +  T A  TTT V+ +P A      A  A A A +P  A   A  V+ A    
Sbjct: 480 AAATAAAITATAATITTTMVAAAPVAVAAA--AAPAAAAAPSPATAAATAAAVSPAAAGQ 537

Query: 69  LEAASSVHVHPWPAGIIAGSATRRKGTDWAP 99
           + AA+SV      A  +A SA        AP
Sbjct: 538 IPAAASVA----SAAAVAPSAAAAAAVQVAP 564



 Score = 30.8 bits (68), Expect = 0.25
 Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 13/89 (14%)

Query: 7   PLAALRASRLAPTGAATTTTSV----------STSPSATTEMGWARAARACAGTPPGAQG 56
           P+AA   +      AAT TT++          + +P+A      A AA   A   P A G
Sbjct: 477 PVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAG 536

Query: 57  D---ALHVAAAGGVGLEAASSVHVHPWPA 82
               A  VA+A  V   AA++  V   PA
Sbjct: 537 QIPAAASVASAAAVAPSAAAAAAVQVAPA 565



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 8/84 (9%)

Query: 17  APTGAATTTTSVS-TSPSATTEMGWARAARACAGTPPGAQGDALHVAAAGGVGLEAASSV 75
           AP  AA T  +++ T+ + TT M  A      A   P A       AAA      AA++ 
Sbjct: 476 APVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAA-------AAAPSPATAAATAA 528

Query: 76  HVHPWPAGIIAGSATRRKGTDWAP 99
            V P  AG I  +A+       AP
Sbjct: 529 AVSPAAAGQIPAAASVASAAAVAP 552


>gi|166064029 angiomotin isoform 1 [Homo sapiens]
          Length = 1084

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 2/92 (2%)

Query: 9    AALRASRLAPTGAATTTTSVSTSPSATTEM-GWARAARACAGTPPGAQGDALHVAAAGGV 67
            AA  A+  AP+ A    T+ + SP+A  ++   A  A A A  P  A   A+ VA A   
Sbjct: 918  AAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPA 977

Query: 68   GLEAASSVHVHPWPAGIIAGSATRRKGTDWAP 99
             + A + V V P PA   A +  + +    AP
Sbjct: 978  PVPAPALVPV-PAPAAAQASAPAQTQAPTSAP 1008



 Score = 33.9 bits (76), Expect = 0.029
 Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 9   AALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAGGVG 68
           AA  A+ +  T A  TTT V+ +P A      A  A A A +P  A   A  V+ A    
Sbjct: 889 AAATAAAITATAATITTTMVAAAPVAVAAA--AAPAAAAAPSPATAAATAAAVSPAAAGQ 946

Query: 69  LEAASSVHVHPWPAGIIAGSATRRKGTDWAP 99
           + AA+SV      A  +A SA        AP
Sbjct: 947 IPAAASVA----SAAAVAPSAAAAAAVQVAP 973



 Score = 30.8 bits (68), Expect = 0.25
 Identities = 27/89 (30%), Positives = 37/89 (41%), Gaps = 13/89 (14%)

Query: 7   PLAALRASRLAPTGAATTTTSV----------STSPSATTEMGWARAARACAGTPPGAQG 56
           P+AA   +      AAT TT++          + +P+A      A AA   A   P A G
Sbjct: 886 PVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAG 945

Query: 57  D---ALHVAAAGGVGLEAASSVHVHPWPA 82
               A  VA+A  V   AA++  V   PA
Sbjct: 946 QIPAAASVASAAAVAPSAAAAAAVQVAPA 974



 Score = 29.6 bits (65), Expect = 0.55
 Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 8/84 (9%)

Query: 17  APTGAATTTTSVS-TSPSATTEMGWARAARACAGTPPGAQGDALHVAAAGGVGLEAASSV 75
           AP  AA T  +++ T+ + TT M  A      A   P A       AAA      AA++ 
Sbjct: 885 APVAAAATAAAITATAATITTTMVAAAPVAVAAAAAPAA-------AAAPSPATAAATAA 937

Query: 76  HVHPWPAGIIAGSATRRKGTDWAP 99
            V P  AG I  +A+       AP
Sbjct: 938 AVSPAAAGQIPAAASVASAAAVAP 961


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 31.2 bits (69), Expect = 0.19
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 6   RPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
           RPL+A + S   P GA     S   + S+T  +G   AARA A +P   + D+    AAG
Sbjct: 818 RPLSASQPS--LPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSPD--RRDSASPGAAG 873

Query: 66  GV 67
           G+
Sbjct: 874 GL 875


>gi|55742678 glucocorticoid induced transcript 1 [Homo sapiens]
          Length = 547

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 22 ATTTTSVSTSPSATTEMGWARAARACAGTPP--GAQGDALHVAAAGGVGLEAAS 73
          +T ++S S+S S T      R  R+ AG+PP   A G        GGVG   A+
Sbjct: 2  STASSSSSSSSSQTPHPPSQRMRRSAAGSPPAVAAAGSGNGAGGGGGVGCAPAA 55


>gi|15150807 tumor protein p53 inducible nuclear protein 1 isoform a
           [Homo sapiens]
          Length = 240

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 6/91 (6%)

Query: 19  TGAATTTTSVSTSPSATT-----EMGWARAARACAGTPPGAQG-DALHVAAAGGVGLEAA 72
           T    TT  V TSP          M       +C G     +G D LH  ++  V  +  
Sbjct: 105 TAGGLTTIKVETSPMENLLIEHPSMSVYAVHNSCPGLSEATRGTDELHSPSSPRVEAQNE 164

Query: 73  SSVHVHPWPAGIIAGSATRRKGTDWAPEDWV 103
              H+H + A + A +    +   + P  W+
Sbjct: 165 MGQHIHCYVAALAAHTTFLEQPKSFRPSQWI 195


>gi|116805350 homeo box (H6 family) 1 [Homo sapiens]
          Length = 348

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 24/69 (34%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 20  GAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG-GVGLEAASSVHVH 78
           G  +  TS   SP    EMG A  A      P   Q +A  +AA G   G E AS +   
Sbjct: 126 GGLSPDTSDRDSPETGEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGTEEASELAEV 185

Query: 79  PWPAGIIAG 87
           P  AG   G
Sbjct: 186 PAAAGETRG 194


>gi|5902108 SRY-box 21 [Homo sapiens]
          Length = 276

 Score = 30.0 bits (66), Expect = 0.42
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 14/88 (15%)

Query: 9   AALRASRL-----APTGAATTTTSVSTSPSATTEMG--WARAARACAGTP-------PGA 54
           AA  A+R+     A   AA    + + SP +  ++G   A  + + +G P       P A
Sbjct: 141 AAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMAEISSSSSGLPYASSLGYPTA 200

Query: 55  QGDALHVAAAGGVGLEAASSVHVHPWPA 82
              A H AAA      AA+  H H  P+
Sbjct: 201 GAGAFHGAAAAAAAAAAAAGGHTHSHPS 228


>gi|239754979 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 780

 Score = 29.6 bits (65), Expect = 0.55
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 6   RPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
           R L+ LR S     GAAT+    S     TT + W     A A  PPG++   L+ +++ 
Sbjct: 349 RQLSRLRRSPPTAPGAATS----SRHAWDTTALLWLATVMAPA-PPPGSRAGPLYFSSSS 403

Query: 66  GVGLEAASSVHVHPWPA 82
              +EAA      P P+
Sbjct: 404 ATLVEAAERTASPPGPS 420


>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
          Length = 818

 Score = 29.6 bits (65), Expect = 0.55
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 9/62 (14%)

Query: 6   RPLAALRASRLAPTGAA--------TTTTSVSTSP-SATTEMGWARAARACAGTPPGAQG 56
           +PL +  A  L+P+G          +TT S   SP SA      +    ACAGT PGAQ 
Sbjct: 563 QPLDSPAAPALSPSGLGLQPGPERTSTTKSKELSPGSAQKGSPGSSQGTACAGTQPGAQP 622

Query: 57  DA 58
            A
Sbjct: 623 GA 624


>gi|122937450 shisa homolog 3 [Homo sapiens]
          Length = 238

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 3/63 (4%)

Query: 7   PLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARAC---AGTPPGAQGDALHVAA 63
           P+     S  AP+  ++T TS S++  +     +ARA   C   +  PP     ++H+A 
Sbjct: 147 PMILTSTSPRAPSRQSSTATSSSSTGGSIRRFSFARAEPGCLVPSPPPPYTTSHSIHLAQ 206

Query: 64  AGG 66
             G
Sbjct: 207 PSG 209


>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
          Length = 1349

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)

Query: 5    LRPLAALRASRLA-PTGAATTTTSVSTSPSATTEMGWARAARACAGTPPG----AQGDAL 59
            L+P AA+  SR + P+  + + +S S SPS    MG+   A      PPG      GD+L
Sbjct: 1239 LQPPAAVSFSRKSTPSTGSPSQSSRSGSPSYRPAMGFTTLATGYPSPPPGPAPAGPGDSL 1298

Query: 60   HV 61
             V
Sbjct: 1299 DV 1300


>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
           [Homo sapiens]
          Length = 3969

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 8/106 (7%)

Query: 1   MRDRLRPLAALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGD--- 57
           MR R   L++   S L P  + +++ S+S SP AT+ +       + + T  G   +   
Sbjct: 755 MRTRSGRLSSSELSPLTPPSSVSSSLSISVSPLATSALNPTFTFPSHSLTQSGESAEKNQ 814

Query: 58  -ALHVAAAGGVGLEAASSVHVHPWPAGIIAGSATRR-KGTDWAPED 101
                 +A      ++S   + PW      GS T R +  D APE+
Sbjct: 815 RPRKQTSAPAEPFSSSSPTPLFPW---FTPGSQTERGRNKDKAPEE 857


>gi|239749065 PREDICTED: hypothetical protein XP_002346903 [Homo
          sapiens]
          Length = 128

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 15/70 (21%)

Query: 32 PSATTEMGWARAAR----ACAGTPPGAQGDALHVAAAGGVGLEAASSVHVHPWPAGIIAG 87
          P   TE+GW R  R    ACA  P G+   A  V  A G       S   H         
Sbjct: 40 PPTVTEVGWGREVRRGFEACA-RPVGSHSGAPRVCRAEGAASPGPPSSSPH--------- 89

Query: 88 SATRRKGTDW 97
            TRR G  W
Sbjct: 90 -LTRRPGGPW 98


>gi|239508743 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 128

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 23/70 (32%), Positives = 25/70 (35%), Gaps = 15/70 (21%)

Query: 32 PSATTEMGWARAAR----ACAGTPPGAQGDALHVAAAGGVGLEAASSVHVHPWPAGIIAG 87
          P   TE+GW R  R    ACA  P G+   A  V  A G       S   H         
Sbjct: 40 PPTVTEVGWGREVRRGFEACA-RPVGSHSGAPRVCRAEGAASPGPPSSSPH--------- 89

Query: 88 SATRRKGTDW 97
            TRR G  W
Sbjct: 90 -LTRRPGGPW 98


>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
          Length = 5765

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 5/48 (10%)

Query: 18   PTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
            PT   TTTT+V+T   AT       ++   +GTPP     A  + A G
Sbjct: 2662 PTVLTTTTTTVATGSMATPS-----SSTQTSGTPPSLTTTATTITATG 2704



 Score = 28.1 bits (61), Expect = 1.6
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 5/48 (10%)

Query: 18   PTGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
            PT   TTTT+V+T   AT       ++   +GTPP     A  + A G
Sbjct: 3919 PTVLTTTTTTVATGSMATPS-----SSTQTSGTPPSLITTATTITATG 3961



 Score = 26.2 bits (56), Expect = 6.1
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 19   TGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
            T   TTTT+V+T   AT       ++   +GTPP     A  + A G
Sbjct: 2106 TVLTTTTTTVATGSMATPS-----SSTQTSGTPPSLTTTATTITATG 2147



 Score = 26.2 bits (56), Expect = 6.1
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)

Query: 19   TGAATTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
            T   TTTT+V+T   AT       ++   +GTPP     A  + A G
Sbjct: 3363 TVLTTTTTTVATGSMATPS-----SSTQTSGTPPSLTTTATTITATG 3404



 Score = 25.8 bits (55), Expect = 7.9
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 23   TTTTSVSTSPSATTEMGWARAARACAGTPPGAQGDALHVAAAG 65
            TTTT+V+T   AT       ++   +GTPP     A  + A G
Sbjct: 4657 TTTTTVATGSMATPS-----SSTQTSGTPPSLTTTATTITATG 4694


>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
           [Homo sapiens]
          Length = 1125

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 10  ALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPP-----GAQGDALHVAA 63
           A+  S+   T A TTT   +  P A T    A AA A A  PP     G  GD +   A
Sbjct: 273 AVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPA 331


>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
           [Homo sapiens]
          Length = 1132

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 10  ALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPP-----GAQGDALHVAA 63
           A+  S+   T A TTT   +  P A T    A AA A A  PP     G  GD +   A
Sbjct: 258 AVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPA 316


>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
           [Homo sapiens]
          Length = 1147

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 10  ALRASRLAPTGAATTTTSVSTSPSATTEMGWARAARACAGTPP-----GAQGDALHVAA 63
           A+  S+   T A TTT   +  P A T    A AA A A  PP     G  GD +   A
Sbjct: 273 AVEESKKEDTTAVTTTAPAAAVPPAPTATVPAAAAPAAASPPPPQAPFGFPGDGMQQPA 331


>gi|219842244 periphilin 1 isoform 6 [Homo sapiens]
          Length = 434

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 2   RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
           RD+ RP+ +L+ SR     +G+A +++ V   PS  TE   A AA
Sbjct: 134 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 178


>gi|48255929 periphilin 1 isoform 1 [Homo sapiens]
          Length = 458

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 2   RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
           RD+ RP+ +L+ SR     +G+A +++ V   PS  TE   A AA
Sbjct: 189 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 233


>gi|41872349 periphilin 1 isoform 4 [Homo sapiens]
          Length = 319

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 2   RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
           RD+ RP+ +L+ SR     +G+A +++ V   PS  TE   A AA
Sbjct: 141 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 185


>gi|41872344 periphilin 1 isoform 3 [Homo sapiens]
          Length = 367

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 2   RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
           RD+ RP+ +L+ SR     +G+A +++ V   PS  TE   A AA
Sbjct: 189 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 233


>gi|41872339 periphilin 1 isoform 5 [Homo sapiens]
          Length = 258

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 2   RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
           RD+ RP+ +L+ SR     +G+A +++ V   PS  TE   A AA
Sbjct: 141 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 185


>gi|41872368 periphilin 1 isoform 2 [Homo sapiens]
          Length = 374

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 2   RDRLRPLAALRASR--LAPTGAATTTTSVSTSPSATTEMGWARAA 44
           RD+ RP+ +L+ SR     +G+A +++ V   PS  TE   A AA
Sbjct: 196 RDKERPVQSLKTSRDTSPSSGSAVSSSKVLDKPSRLTEKELAEAA 240


>gi|160420328 iron-sulfur cluster assembly 2 [Homo sapiens]
          Length = 154

 Score = 28.9 bits (63), Expect = 0.93
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)

Query: 61  VAAAGGVGLEAASSVHVHPWPAGII----AGSATRRKGTDWAPE 100
           +AAA G  L AA+   V PWP G +     G   RR+ +  +PE
Sbjct: 1   MAAAWGSSLTAATQRAVTPWPRGRLLTASLGPQARREASSSSPE 44


>gi|194363768 homeobox D9 [Homo sapiens]
          Length = 352

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 31/87 (35%), Positives = 36/87 (41%), Gaps = 26/87 (29%)

Query: 17  APTGAATTTTSVSTSPSAT---TEMGWAR-------------------AARACAGTPPGA 54
           AP  AA+TT+S STS S++   TE   AR                   AA A  GT PGA
Sbjct: 169 APATAASTTSSSSTSLSSSSKRTECSVARESQGSSGPEFSCNSFLQEKAAAATGGTGPGA 228

Query: 55  QGDALHVAAAGGVGLEAASSVHVHPWP 81
                  AA G  G    S+   HP P
Sbjct: 229 GIG----AATGTGGSSEPSACSDHPIP 251


>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
          Length = 2013

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 2    RDRLRPLAALRASRLAP--TGAATTTTSVSTSPSATTE 37
            RD  RP   +  +R  P  TGA T TT  +  PSA+TE
Sbjct: 1678 RDITRPPKTVATTRPTPHPTGAQTQTTFTTHMPSASTE 1715


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.126    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,366,441
Number of Sequences: 37866
Number of extensions: 189833
Number of successful extensions: 1385
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 1282
Number of HSP's gapped (non-prelim): 152
length of query: 107
length of database: 18,247,518
effective HSP length: 77
effective length of query: 30
effective length of database: 15,331,836
effective search space: 459955080
effective search space used: 459955080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.