PPHLN1 27865

Name: PPHLN1	Sequence: fasta or formatted (319aa)		NCBI GI: 41872349
Description: periphilin 1 isoform 4		Referenced in: Stomach, Small Intestine, and Colon
Other entries for this name: alt prot [434aa] periphilin 1 isoform 6 alt prot [348aa] periphilin 1 isoform 7 alt prot [293aa] periphilin 1 isoform 8 alt prot [258aa] periphilin 1 isoform 5 alt prot [367aa] periphilin 1 isoform 3 alt prot [374aa] periphilin 1 isoform 2 alt prot [458aa] periphilin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 17 2 C cysteine 0.6 2 1 D aspartate 5.6 18 2 E glutamate 11.9 38 2 F phenylalanine 3.8 12 2 G glycine 4.1 13 1 H histidine 2.8 9 1 I isoleucine 2.8 9 1 K lysine 6.6 21 1 L leucine 4.4 14 1 M methionine 1.6 5 1 N asparagine 1.9 6 1 P proline 6.3 20 2 Q glutamine 3.8 12 1 R arginine 10.3 33 2 S serine 15.0 48 3 T threonine 4.7 15 2 V valine 3.1 10 2 W tryptophan 0.9 3 1 Y tyrosine 4.4 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 periphilin 1 isoform 4 PPHLN1 0.918 periphilin 1 isoform 2 PPHLN1 0.899 periphilin 1 isoform 3 PPHLN1 0.894 periphilin 1 isoform 8 PPHLN1 0.889 periphilin 1 isoform 6 PPHLN1 0.815 periphilin 1 isoform 7 PPHLN1 0.810 periphilin 1 isoform 1 PPHLN1 0.794 periphilin 1 isoform 5 LOC100170229 0.042 hypothetical protein LOC100170229 KIAA1853 0.037 KIAA1853 protein SFRS8 0.037 splicing factor, arginine/serine-rich 8 SFRS16 0.037 splicing factor, arginine/serine-rich 16 SFRS2B 0.032 splicing factor, arginine/serine-rich 2B ZNF638 0.031 zinc finger protein 638 ZNF638 0.031 zinc finger protein 638 CROP 0.029 cisplatin resistance-associated overexpressed protei... CROP 0.029 cisplatin resistance-associated overexpressed protei... SFRS4 0.027 splicing factor, arginine/serine-rich 4 SRRM1 0.027 serine/arginine repetitive matrix 1 CRKRS 0.027 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.027 Cdc2-related kinase, arginine/serine-rich isoform 1... TRIOBP 0.027 TRIO and F-actin binding protein isoform 6 SRRM2 0.027 splicing coactivator subunit SRm300 SPEN 0.026 spen homolog, transcriptional regulator PHRF1 0.026 PHD and ring finger domains 1 SETD2 0.026 SET domain containing 2 PRPF38A 0.026 PRP38 pre-mRNA processing factor 38 (yeast) domain c... GPATCH8 0.024 G patch domain containing 8 NKTR 0.024 natural killer-tumor recognition sequence APC 0.023 adenomatous polyposis coli Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.