PPHLN1 27863

Name: PPHLN1	Sequence: fasta or formatted (258aa)		NCBI GI: 41872339
Description: periphilin 1 isoform 5		Referenced in: Stomach, Small Intestine, and Colon
Other entries for this name: alt prot [434aa] periphilin 1 isoform 6 alt prot [348aa] periphilin 1 isoform 7 alt prot [293aa] periphilin 1 isoform 8 alt prot [367aa] periphilin 1 isoform 3 alt prot [319aa] periphilin 1 isoform 4 alt prot [374aa] periphilin 1 isoform 2 alt prot [458aa] periphilin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 15 2 C cysteine 0.0 0 0 D aspartate 5.4 14 2 E glutamate 11.2 29 2 F phenylalanine 2.7 7 2 G glycine 3.9 10 1 H histidine 2.7 7 1 I isoleucine 1.9 5 1 K lysine 6.6 17 1 L leucine 3.5 9 1 M methionine 1.2 3 1 N asparagine 1.9 5 1 P proline 7.0 18 2 Q glutamine 3.1 8 1 R arginine 12.0 31 2 S serine 17.4 45 3 T threonine 4.7 12 2 V valine 3.1 8 1 W tryptophan 1.2 3 1 Y tyrosine 4.7 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 periphilin 1 isoform 5 PPHLN1 0.994 periphilin 1 isoform 4 PPHLN1 0.966 periphilin 1 isoform 6 PPHLN1 0.889 periphilin 1 isoform 2 PPHLN1 0.867 periphilin 1 isoform 1 PPHLN1 0.867 periphilin 1 isoform 3 PPHLN1 0.859 periphilin 1 isoform 8 PPHLN1 0.762 periphilin 1 isoform 7 LOC100170229 0.052 hypothetical protein LOC100170229 KIAA1853 0.046 KIAA1853 protein SFRS8 0.046 splicing factor, arginine/serine-rich 8 SFRS16 0.046 splicing factor, arginine/serine-rich 16 SFRS2B 0.040 splicing factor, arginine/serine-rich 2B ZNF638 0.038 zinc finger protein 638 ZNF638 0.038 zinc finger protein 638 CROP 0.036 cisplatin resistance-associated overexpressed protei... CROP 0.036 cisplatin resistance-associated overexpressed protei... SFRS4 0.034 splicing factor, arginine/serine-rich 4 SRRM1 0.034 serine/arginine repetitive matrix 1 CRKRS 0.034 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.034 Cdc2-related kinase, arginine/serine-rich isoform 1... TRIOBP 0.034 TRIO and F-actin binding protein isoform 6 SRRM2 0.034 splicing coactivator subunit SRm300 SPEN 0.032 spen homolog, transcriptional regulator PHRF1 0.032 PHD and ring finger domains 1 SETD2 0.032 SET domain containing 2 PRPF38A 0.032 PRP38 pre-mRNA processing factor 38 (yeast) domain c... GPATCH8 0.030 G patch domain containing 8 NKTR 0.030 natural killer-tumor recognition sequence APC 0.028 adenomatous polyposis coli Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.