PPHLN1 13907

Name: PPHLN1	Sequence: fasta or formatted (434aa)		NCBI GI: 219842244
Description: periphilin 1 isoform 6		Referenced in: Stomach, Small Intestine, and Colon
Other entries for this name: alt prot [348aa] periphilin 1 isoform 7 alt prot [293aa] periphilin 1 isoform 8 alt prot [258aa] periphilin 1 isoform 5 alt prot [367aa] periphilin 1 isoform 3 alt prot [319aa] periphilin 1 isoform 4 alt prot [374aa] periphilin 1 isoform 2 alt prot [458aa] periphilin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 24 2 C cysteine 0.5 2 1 D aspartate 4.6 20 2 E glutamate 10.1 44 2 F phenylalanine 3.0 13 2 G glycine 4.4 19 1 H histidine 2.8 12 1 I isoleucine 2.5 11 1 K lysine 6.5 28 2 L leucine 5.5 24 2 M methionine 1.8 8 1 N asparagine 3.0 13 1 P proline 7.8 34 2 Q glutamine 6.0 26 2 R arginine 9.2 40 2 S serine 12.0 52 3 T threonine 6.9 30 2 V valine 3.9 17 2 W tryptophan 1.2 5 1 Y tyrosine 2.8 12 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 periphilin 1 isoform 6 PPHLN1 0.850 periphilin 1 isoform 1 PPHLN1 0.646 periphilin 1 isoform 4 PPHLN1 0.588 periphilin 1 isoform 3 PPHLN1 0.588 periphilin 1 isoform 2 PPHLN1 0.585 periphilin 1 isoform 8 PPHLN1 0.560 periphilin 1 isoform 5 PPHLN1 0.527 periphilin 1 isoform 7 LOC100170229 0.028 hypothetical protein LOC100170229 SFRS8 0.027 splicing factor, arginine/serine-rich 8 KIAA1853 0.026 KIAA1853 protein SFRS16 0.025 splicing factor, arginine/serine-rich 16 SFRS2B 0.023 splicing factor, arginine/serine-rich 2B ZNF638 0.022 zinc finger protein 638 ZNF638 0.022 zinc finger protein 638 SFRS4 0.020 splicing factor, arginine/serine-rich 4 CROP 0.020 cisplatin resistance-associated overexpressed protei... CROP 0.020 cisplatin resistance-associated overexpressed protei... CRKRS 0.020 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.020 Cdc2-related kinase, arginine/serine-rich isoform 1... TRIOBP 0.020 TRIO and F-actin binding protein isoform 6 SRRM2 0.020 splicing coactivator subunit SRm300 SPEN 0.019 spen homolog, transcriptional regulator PHRF1 0.019 PHD and ring finger domains 1 APC 0.019 adenomatous polyposis coli APC 0.019 adenomatous polyposis coli APC 0.019 adenomatous polyposis coli SETD2 0.019 SET domain containing 2 PRPF38A 0.019 PRP38 pre-mRNA processing factor 38 (yeast) domain c... NKTR 0.018 natural killer-tumor recognition sequence Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.