Guide to the Human Genome
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Name: ISCA2 Sequence: fasta or formatted (154aa) NCBI GI: 160420328
Description:

iron-sulfur cluster assembly 2

Referenced in:

Iron, Copper, and Arsenic Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         14           3
 C cysteine            2.6          4           1
 D aspartate           4.5          7           2
 E glutamate           5.8          9           1
 F phenylalanine       5.2          8           1
 G glycine             9.7         15           3
 H histidine           0.0          0           0
 I isoleucine          3.2          5           1
 K lysine              1.9          3           1
 L leucine             9.1         14           2
 M methionine          0.6          1           1
 N asparagine          1.9          3           2
 P proline             3.9          6           1
 Q glutamine           8.4         13           2
 R arginine            7.1         11           2
 S serine             13.0         20           4
 T threonine           4.5          7           1
 V valine              7.1         11           3
 W tryptophan          1.3          2           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   iron-sulfur cluster assembly 2 
ISCA1                 0.104   HESB like domain containing 2 
ISCA1L                0.032   iron-sulfur cluster assembly 1 homolog (S. cerevisi...
BPTF                  0.018   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.018   bromodomain PHD finger transcription factor isoform ...
LOC100132388          0.014   PREDICTED: hypothetical protein 
LOC100132388          0.014   PREDICTED: hypothetical protein 
RNASEH2B              0.011   ribonuclease H2, subunit B isoform 1 
RNASEH2B              0.011   ribonuclease H2, subunit B isoform 2 
QTRTD1                0.011   queuine tRNA-ribosyltransferase domain containing 1 ...
TCF20                 0.011   transcription factor 20 isoform 2 
TCF20                 0.011   transcription factor 20 isoform 1 
DLEC1                 0.007   deleted in lung and esophageal cancer 1 isoform DLEC...
DLEC1                 0.007   deleted in lung and esophageal cancer 1 isoform DLEC...
LOC100132388          0.007   PREDICTED: hypothetical protein 
LOC100289444          0.007   PREDICTED: hypothetical protein 
LOC100289444          0.007   PREDICTED: hypothetical protein XP_002342754 
LOC100289444          0.007   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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