HMX1 1895

Name: HMX1	Sequence: fasta or formatted (348aa)		NCBI GI: 116805350
Description: homeo box (H6 family) 1		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 17.2 60 5 C cysteine 0.3 1 1 D aspartate 3.7 13 4 E glutamate 8.3 29 3 F phenylalanine 2.9 10 1 G glycine 12.6 44 3 H histidine 0.6 2 1 I isoleucine 0.6 2 1 K lysine 2.3 8 3 L leucine 9.8 34 2 M methionine 0.9 3 1 N asparagine 0.9 3 1 P proline 11.5 40 4 Q glutamine 3.7 13 1 R arginine 9.5 33 4 S serine 5.2 18 2 T threonine 4.0 14 1 V valine 3.4 12 1 W tryptophan 1.1 4 1 Y tyrosine 1.4 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeo box (H6 family) 1 HMX3 0.231 H6 family homeobox 3 HMX2 0.173 H6 family homeobox 2 NKX1-1 0.139 PREDICTED: HPX-153 homeobox NKX1-1 0.138 PREDICTED: NK1 homeobox 1 NKX3-2 0.117 NK3 homeobox 2 NKX1-1 0.107 PREDICTED: NK1 homeobox 1 NKX2-3 0.105 NK2 transcription factor related, locus 3 NKX2-5 0.105 NK2 transcription factor related, locus 5 NKX2-4 0.105 NK2 homeobox 4 BARHL1 0.104 BarH-like homeobox 1 NKX6-2 0.098 NK6 transcription factor related, locus 2 PDX1 0.096 pancreatic and duodenal homeobox 1 NKX2-6 0.096 NK2 transcription factor related, locus 6 TLX2 0.095 T-cell leukemia homeobox 2 BARHL2 0.093 BarH-like homeobox 2 NKX2-2 0.092 NK2 transcription factor related, locus 2 TLX1 0.092 T-cell leukemia homeobox 1 NKX2-8 0.090 NK2 homeobox 8 MNX1 0.089 homeo box HB9 TLX3 0.089 T-cell leukemia homeobox 3 NKX1-2 0.087 NK1 homeobox 2 NKX1-2 0.087 PREDICTED: NK1 homeobox 2 NKX1-2 0.087 PREDICTED: NK1 homeobox 2 NKX1-2 0.087 PREDICTED: NK1 homeobox 2 NKX6-1 0.087 NK6 transcription factor related, locus 1 HOXA4 0.087 homeobox A4 GBX1 0.087 gastrulation brain homeo box 1 HOXD3 0.084 homeobox D3 GBX2 0.084 gastrulation brain homeo box 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.