Guide to the Human Genome
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Name: TP53INP1 Sequence: fasta or formatted (240aa) NCBI GI: 15150807
Description:

tumor protein p53 inducible nuclear protein 1 isoform a

Referenced in:

p53 Pathway

Other entries for this name:
alt prot [164aa] tumor protein p53 inducible nuclear protein 1 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         11           2
 C cysteine            4.2         10           1
 D aspartate           3.8          9           2
 E glutamate          12.5         30           7
 F phenylalanine       5.0         12           1
 G glycine             3.3          8           2
 H histidine           4.6         11           1
 I isoleucine          3.3          8           1
 K lysine              2.5          6           1
 L leucine             6.7         16           2
 M methionine          2.5          6           1
 N asparagine          4.6         11           1
 P proline             7.9         19           3
 Q glutamine           5.0         12           1
 R arginine            4.6         11           2
 S serine             10.8         26           4
 T threonine           5.8         14           2
 V valine              5.0         12           2
 W tryptophan          1.7          4           1
 Y tyrosine            1.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor protein p53 inducible nuclear protein 1 isofor... 
TP53INP1              0.630   tumor protein p53 inducible nuclear protein 1 isofo...
TP53INP2              0.165   tumor protein p53 inducible nuclear protein 2 
TTLL4                 0.021   tubulin tyrosine ligase-like family, member 4 [Homo...
MUC5AC                0.019   mucin 5AC 
MUC5B                 0.019   mucin 5, subtype B, tracheobronchial 
NEUROD1               0.014   neurogenic differentiation 1 
KIAA0406              0.014   hypothetical protein LOC9675 
PRKCSH                0.012   protein kinase C substrate 80K-H isoform 1 
LOC100132388          0.012   PREDICTED: hypothetical protein 
PELP1                 0.012   proline, glutamic acid and leucine rich protein 1 [...
TAF7L                 0.010   TATA box binding protein-associated factor, RNA poly...
IQSEC1                0.010   IQ motif and Sec7 domain 1 isoform a 
ZDBF2                 0.010   zinc finger, DBF-type containing 2 
ARID4B                0.010   AT rich interactive domain 4B isoform 1 
LOC100132388          0.010   PREDICTED: hypothetical protein 
LOC100132388          0.010   PREDICTED: hypothetical protein 
ATF7IP                0.010   activating transcription factor 7 interacting protei...
HAP1                  0.010   huntingtin-associated protein 1 isoform 4 
HAP1                  0.010   huntingtin-associated protein 1 isoform 3 
HAP1                  0.010   huntingtin-associated protein 1 isoform 2 
MYST4                 0.010   MYST histone acetyltransferase (monocytic leukemia)...
IMPG2                 0.010   interphotoreceptor matrix proteoglycan 2 
NBN                   0.010   nibrin 
CDC2L2                0.010   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.010   cell division cycle 2-like 2 isoform 1 
DOCK2                 0.010   dedicator of cytokinesis 2 
SLC24A1               0.010   solute carrier family 24 (sodium/potassium/calcium ex...
CDC2L1                0.010   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.010   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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