PPHLN1 27866

Name: PPHLN1	Sequence: fasta or formatted (374aa)		NCBI GI: 41872368
Description: periphilin 1 isoform 2		Referenced in: Stomach, Small Intestine, and Colon
Other entries for this name: alt prot [434aa] periphilin 1 isoform 6 alt prot [348aa] periphilin 1 isoform 7 alt prot [293aa] periphilin 1 isoform 8 alt prot [258aa] periphilin 1 isoform 5 alt prot [367aa] periphilin 1 isoform 3 alt prot [319aa] periphilin 1 isoform 4 alt prot [458aa] periphilin 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 17 2 C cysteine 0.5 2 1 D aspartate 6.4 24 2 E glutamate 10.7 40 2 F phenylalanine 3.5 13 2 G glycine 5.1 19 1 H histidine 3.2 12 1 I isoleucine 2.7 10 1 K lysine 6.1 23 2 L leucine 4.5 17 2 M methionine 1.3 5 1 N asparagine 2.4 9 1 P proline 7.0 26 2 Q glutamine 3.2 12 1 R arginine 11.0 41 2 S serine 14.2 53 3 T threonine 4.0 15 2 V valine 3.5 13 2 W tryptophan 0.8 3 1 Y tyrosine 5.3 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 periphilin 1 isoform 2 PPHLN1 0.981 periphilin 1 isoform 3 PPHLN1 0.911 periphilin 1 isoform 7 PPHLN1 0.907 periphilin 1 isoform 1 PPHLN1 0.769 periphilin 1 isoform 4 PPHLN1 0.683 periphilin 1 isoform 8 PPHLN1 0.679 periphilin 1 isoform 6 PPHLN1 0.595 periphilin 1 isoform 5 LOC100170229 0.036 hypothetical protein LOC100170229 SFRS4 0.032 splicing factor, arginine/serine-rich 4 CRKRS 0.030 Cdc2-related kinase, arginine/serine-rich isoform 2... CRKRS 0.030 Cdc2-related kinase, arginine/serine-rich isoform 1... KIAA1853 0.030 KIAA1853 protein SFRS2B 0.030 splicing factor, arginine/serine-rich 2B SFRS8 0.027 splicing factor, arginine/serine-rich 8 PPIG 0.027 peptidylprolyl isomerase G SFRS16 0.027 splicing factor, arginine/serine-rich 16 BUD13 0.026 BUD13 homolog isoform 2 CDC2L5 0.026 cell division cycle 2-like 5 isoform 1 CDC2L5 0.026 cell division cycle 2-like 5 isoform 2 DHX38 0.026 DEAH (Asp-Glu-Ala-His) box polypeptide 38 SFRS11 0.026 splicing factor, arginine/serine-rich 11 PRPF4B 0.023 serine/threonine-protein kinase PRP4K RSRC2 0.023 arginine/serine-rich coiled-coil 2 isoform a PHRF1 0.022 PHD and ring finger domains 1 ZNF638 0.022 zinc finger protein 638 ZNF638 0.022 zinc finger protein 638 RSRC2 0.022 arginine/serine-rich coiled-coil 2 isoform b SPEN 0.022 spen homolog, transcriptional regulator FUSIP1 0.022 FUS interacting protein (serine-arginine rich) 1 iso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.