Guide to the Human Genome
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Name: AMOT Sequence: fasta or formatted (1084aa) NCBI GI: 166064029
Description:

angiomotin isoform 1

Referenced in:

Cardiovascular System

Other entries for this name:
alt prot [675aa] angiomotin isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.8        139           6
 C cysteine            0.7          8           1
 D aspartate           2.7         29           2
 E glutamate           8.0         87           4
 F phenylalanine       1.1         12           1
 G glycine             4.6         50           2
 H histidine           3.4         37           7
 I isoleucine          2.9         31           2
 K lysine              4.6         50           3
 L leucine             7.9         86           2
 M methionine          2.4         26           1
 N asparagine          3.3         36           2
 P proline             9.2        100           3
 Q glutamine           9.2        100           9
 R arginine            6.0         65           2
 S serine              8.5         92           3
 T threonine           5.4         58           3
 V valine              4.9         53           2
 W tryptophan          0.2          2           1
 Y tyrosine            2.1         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   angiomotin isoform 1 
AMOT                  0.599   angiomotin isoform 2 
AMOTL1                0.345   angiomotin like 1 
AMOTL2                0.182   angiomotin like 2 
BAT2D1                0.030   HBxAg transactivated protein 2 
LDB3                  0.030   LIM domain binding 3 isoform 1 
FAM48B1               0.028   hypothetical protein LOC100130302 
KRTAP4-6              0.027   PREDICTED: keratin associated protein 4.6 
SRCAP                 0.027   Snf2-related CBP activator protein 
CCDC88A               0.026   coiled-coil domain containing 88A isoform 2 
BCORL1                0.026   BCL6 co-repressor-like 1 
KRTAP4-9              0.026   PREDICTED: keratin associated protein 4-9 
CCDC88A               0.025   coiled-coil domain containing 88A isoform 1 
CDKN1C                0.025   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.025   cyclin-dependent kinase inhibitor 1C isoform b [Hom...
CDKN1C                0.025   cyclin-dependent kinase inhibitor 1C isoform a 
KIAA0754              0.024   hypothetical protein LOC643314 
LDB3                  0.023   LIM domain binding 3 isoform 2 
SAMD1                 0.022   sterile alpha motif domain containing 1 
MUC7                  0.022   mucin 7, secreted precursor 
MUC7                  0.022   mucin 7, secreted precursor 
MUC7                  0.022   mucin 7, secreted precursor 
CCDC88C               0.022   DVL-binding protein DAPLE 
TCHH                  0.022   trichohyalin 
SNAP91                0.021   synaptosomal-associated protein, 91kDa homolog 
LOC440243             0.021   PREDICTED: Putative golgin subfamily A member 6-lik...
MYH9                  0.021   myosin, heavy polypeptide 9, non-muscle 
TAF4                  0.021   TBP-associated factor 4 
MUC17                 0.021   mucin 17 
LOC100294420          0.020   PREDICTED: similar to mucin 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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