LOC400236 8550

Name: LOC400236	Sequence: fasta or formatted (330aa)		NCBI GI: 169207782
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt mRNA {330aa} PREDICTED: hypothetical protein alt prot {225aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 32 3 C cysteine 2.1 7 1 D aspartate 2.1 7 1 E glutamate 3.9 13 1 F phenylalanine 3.0 10 1 G glycine 14.8 49 2 H histidine 1.2 4 1 I isoleucine 0.9 3 1 K lysine 1.5 5 2 L leucine 7.9 26 2 M methionine 0.6 2 1 N asparagine 2.1 7 1 P proline 14.5 48 2 Q glutamine 3.3 11 2 R arginine 14.5 48 3 S serine 7.3 24 2 T threonine 5.2 17 1 V valine 3.9 13 1 W tryptophan 0.9 3 1 Y tyrosine 0.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC400236 1.000 PREDICTED: hypothetical protein LOC400236 0.340 PREDICTED: hypothetical protein COL3A1 0.063 collagen type III alpha 1 preproprotein COL16A1 0.056 alpha 1 type XVI collagen precursor COL1A1 0.056 alpha 1 type I collagen preproprotein COL2A1 0.053 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.053 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL4A3 0.051 alpha 3 type IV collagen isoform 4 precursor COL4A3 0.051 alpha 3 type IV collagen isoform 2 precursor COL4A3 0.051 alpha 3 type IV collagen isoform 1 precursor COL4A3 0.051 alpha 3 type IV collagen isoform 5 precursor COL1A2 0.048 alpha 2 type I collagen COL8A2 0.048 collagen, type VIII, alpha 2 COL27A1 0.047 collagen, type XXVII, alpha 1 COL9A1 0.047 alpha 1 type IX collagen isoform 1 precursor COL9A1 0.045 alpha 1 type IX collagen isoform 2 precursor COL4A6 0.044 type IV alpha 6 collagen isoform A precursor COL4A4 0.044 alpha 4 type IV collagen precursor COL4A6 0.044 type IV alpha 6 collagen isoform B precursor COL18A1 0.042 alpha 1 type XVIII collagen isoform 3 precursor [Ho... COL18A1 0.042 alpha 1 type XVIII collagen isoform 2 precursor [Ho... COL18A1 0.042 alpha 1 type XVIII collagen isoform 1 precursor [Ho... COL11A2 0.042 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.042 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.042 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL8A1 0.042 alpha 1 type VIII collagen precursor COL8A1 0.042 alpha 1 type VIII collagen precursor COL7A1 0.041 alpha 1 type VII collagen precursor COL17A1 0.041 alpha 1 type XVII collagen Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.