Search of human proteins with 169177938

Search of human proteins with 169177938

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169177938 PREDICTED: similar to chromosome 9 open reading
frame 147 [Homo sapiens]
         (208 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169177938 PREDICTED: similar to chromosome 9 open reading fra...   437   e-123
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]            45   6e-05
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]            45   6e-05
gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]            44   1e-04
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         39   0.002
gi|239745938 PREDICTED: hypothetical protein [Homo sapiens]            39   0.003
gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]            37   0.016
gi|188536004 zinc finger protein 469 [Homo sapiens]                    37   0.016
gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens]         35   0.035
gi|149944526 additional sex combs like 3 [Homo sapiens]                35   0.035
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    35   0.045
gi|14110407 heterogeneous nuclear ribonucleoprotein D-like [Homo...    35   0.059
gi|18702331 OTU domain containing 7A [Homo sapiens]                    35   0.059
gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo...    35   0.059
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    34   0.077
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]            34   0.077
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ...    34   0.077
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    34   0.10 
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re...    34   0.10 
gi|113423021 PREDICTED: similar to hCG1820409 [Homo sapiens]           33   0.13 
gi|113422497 PREDICTED: similar to hCG1820409 [Homo sapiens]           33   0.13 
gi|239757099 PREDICTED: hypothetical protein [Homo sapiens]            33   0.17 
gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo ...    33   0.17 
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]            33   0.17 
gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo ...    33   0.17 
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]            33   0.17 
gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens]           33   0.17 
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]             33   0.17 
gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens]           33   0.22 
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]            33   0.22 

>gi|169177938 PREDICTED: similar to chromosome 9 open reading frame
           147 [Homo sapiens]
          Length = 208

 Score =  437 bits (1123), Expect = e-123
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MWSETQEQERGRQPHALRLQPPLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAA 60
           MWSETQEQERGRQPHALRLQPPLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAA
Sbjct: 1   MWSETQEQERGRQPHALRLQPPLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAA 60

Query: 61  RVPALAPASLPREETKGSRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRCRPSLLPH 120
           RVPALAPASLPREETKGSRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRCRPSLLPH
Sbjct: 61  RVPALAPASLPREETKGSRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRCRPSLLPH 120

Query: 121 TRSHAAAGALDREVGAIHPPRARAQSLLPRQVWNPPSPLWSEEVYSTAPYYTSWARGPRC 180
           TRSHAAAGALDREVGAIHPPRARAQSLLPRQVWNPPSPLWSEEVYSTAPYYTSWARGPRC
Sbjct: 121 TRSHAAAGALDREVGAIHPPRARAQSLLPRQVWNPPSPLWSEEVYSTAPYYTSWARGPRC 180

Query: 181 PPELCAPPLKRKEQTEPTPSVRFFPSPL 208
           PPELCAPPLKRKEQTEPTPSVRFFPSPL
Sbjct: 181 PPELCAPPLKRKEQTEPTPSVRFFPSPL 208


>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 64/195 (32%), Positives = 75/195 (38%), Gaps = 38/195 (19%)

Query: 18  RLQPPLRPELPGGGAARGRRTGAATGGLCAS-HPQARRCRRAAARVPALAPASLPRE--- 73
           R  PPL+P L  G A+  R      G    S  P  RRCRR A R PA     LPR    
Sbjct: 276 RSPPPLQPRL--GSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR 333

Query: 74  --ETKGSRHRK----RAVVGETHRKCVTTPPTARTELAVVAAPRRC--RPSLLPHTRSHA 125
             E  G+R R+    R V G      + +PP      A  AAP R   R +     +   
Sbjct: 334 GGEVVGARRRRGGEERRVRGRRQGCALGSPPIP----AGPAAPGRAGERRAARQWRKRGG 389

Query: 126 AAGALDRE------VGAIHPPRARAQSLLPRQVWNPPSP-LWSEEVYSTAPYYTSWARGP 178
             G   RE      V     PRAR  S   R     PSP  W       APY   +A GP
Sbjct: 390 GPGVSPREGAQGEGVRGGVTPRARGSSTCLR-----PSPATWQ----GGAPYRAIFAAGP 440

Query: 179 RCPPELCAPPLKRKE 193
           R    L AP  + +E
Sbjct: 441 R----LSAPSAEAEE 451


>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 520

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 64/195 (32%), Positives = 75/195 (38%), Gaps = 38/195 (19%)

Query: 18  RLQPPLRPELPGGGAARGRRTGAATGGLCAS-HPQARRCRRAAARVPALAPASLPRE--- 73
           R  PPL+P L  G A+  R      G    S  P  RRCRR A R PA     LPR    
Sbjct: 276 RSPPPLQPRL--GSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSR 333

Query: 74  --ETKGSRHRK----RAVVGETHRKCVTTPPTARTELAVVAAPRRC--RPSLLPHTRSHA 125
             E  G+R R+    R V G      + +PP      A  AAP R   R +     +   
Sbjct: 334 GGEVVGARRRRGGEERRVRGRRQGCALGSPPIP----AGPAAPGRAGERRAARQWRKRGG 389

Query: 126 AAGALDRE------VGAIHPPRARAQSLLPRQVWNPPSP-LWSEEVYSTAPYYTSWARGP 178
             G   RE      V     PRAR  S   R     PSP  W       APY   +A GP
Sbjct: 390 GPGVSPREGAQGEGVRGGVTPRARGSSTCLR-----PSPATWQ----GGAPYRAIFAAGP 440

Query: 179 RCPPELCAPPLKRKE 193
           R    L AP  + +E
Sbjct: 441 R----LSAPSAEAEE 451


>gi|169160903 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 426

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 63/192 (32%), Positives = 74/192 (38%), Gaps = 38/192 (19%)

Query: 21  PPLRPELPGGGAARGRRTGAATGGLCAS-HPQARRCRRAAARVPALAPASLPRE-----E 74
           PPL+P L  G A+  R      G    S  P  RRCRR A R PA     LPR      E
Sbjct: 185 PPLQPRL--GSASPPRLAAPLAGSRAPSLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGE 242

Query: 75  TKGSRHRK----RAVVGETHRKCVTTPPTARTELAVVAAPRRC--RPSLLPHTRSHAAAG 128
             G+R R+    R V G      + +PP      A  AAP R   R +     +     G
Sbjct: 243 VVGARRRRGGEERRVRGRRQGCALGSPPIP----AGPAAPGRAGERRAARQWRKRGGGPG 298

Query: 129 ALDRE------VGAIHPPRARAQSLLPRQVWNPPSP-LWSEEVYSTAPYYTSWARGPRCP 181
              RE      V     PRAR  S   R     PSP  W       APY   +A GPR  
Sbjct: 299 VSPREGAQGEGVRGGVTPRARGSSTCLR-----PSPATWQ----GGAPYRAIFAAGPR-- 347

Query: 182 PELCAPPLKRKE 193
             L AP  + +E
Sbjct: 348 --LSAPSAEAEE 357


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 43/168 (25%), Positives = 63/168 (37%), Gaps = 13/168 (7%)

Query: 53  RRCRRAAARVPALAPASLPREETKGSRHRKRAVVGETHRKCVTTP-PTARTELAVVAAPR 111
           RR R + +R  + +P    +E +   R R+      T R+   +P P  R        PR
Sbjct: 519 RRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPR 578

Query: 112 RCRPSLLPHTRSHAA---AGALDREVGAIHPPRARAQSLLP--RQVWNPPSPLWSEEVYS 166
           R  PS  P  RS +    +  + R      PP+ R  S  P  ++  +P  P      +S
Sbjct: 579 RRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHS 638

Query: 167 TAPYYTSWARGPRCPPELCA-------PPLKRKEQTEPTPSVRFFPSP 207
             P   S     R  P L +       P    +E   P P+ R  PSP
Sbjct: 639 PPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSP 686



 Score = 35.0 bits (79), Expect = 0.045
 Identities = 44/160 (27%), Positives = 61/160 (38%), Gaps = 30/160 (18%)

Query: 48  SHPQARRCRRAAARVPALAPASLPREETKGSRHRKRAVVGETHRKCVTTPPTARTELAVV 107
           SH +     R     P+ + +  PR+  K +  R R       R+  + PPT R      
Sbjct: 510 SHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGR------RRRSPSPPPTRRRRSPSP 563

Query: 108 AAPRRCRPSLLPHTRSHAAAGALDREVGAIHPPRARAQSLLPRQVWNPPSPLWSEEVYST 167
           A P R R +  P  R    +           PPR R+ S  PR+ ++PP     +  YS 
Sbjct: 564 APPPRRRRTPTPPPRRRTPSP----------PPRRRSPS--PRR-YSPPI----QRRYSP 606

Query: 168 APYYTSWARGPRCPPELCAPPLKRKEQTEPTPSVRFFPSP 207
           +P      R    PP    PP KR+    P P  R   SP
Sbjct: 607 SP---PPKRRTASPP----PPPKRRASPSPPPKRRVSHSP 639



 Score = 33.5 bits (75), Expect = 0.13
 Identities = 53/193 (27%), Positives = 71/193 (36%), Gaps = 27/193 (13%)

Query: 22  PLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAARVPALAPASLPREETKGSR-H 80
           P + EL      +G +  AA      S  Q R+ RR   +  + + +S   E+ +  R H
Sbjct: 457 PRKVELSESEEDKGGKMAAAD-----SVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSH 511

Query: 81  RKRAVVGETHR----KCVTTPPTARTELAVVAAPRRCRPSLLP--HTRSHAAAGALDREV 134
            K   VG   R    +  +  P  R +       RR  PS  P    RS + A    R  
Sbjct: 512 VKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRR 571

Query: 135 GAIHPPRARAQSLLPRQVWNPPSPLWSEEVYSTAPYYTSWARGPRCPPELCAPPLKRKEQ 194
               PPR R  S  PR+    PSP      YS  P    ++  P        PP +R   
Sbjct: 572 TPTPPPRRRTPSPPPRR--RSPSP----RRYSP-PIQRRYSPSP--------PPKRRTAS 616

Query: 195 TEPTPSVRFFPSP 207
             P P  R  PSP
Sbjct: 617 PPPPPKRRASPSP 629


>gi|239745938 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 336

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 19  LQPPLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAARVPALAPASLPREETKGS 78
           L PP+ P+L GGG   G   GA  G    S  +A  C     R+P +   S PR   KG 
Sbjct: 214 LSPPMGPDLGGGGGGAGAGAGAGAGAQ-RSAAEAAGCLGCLPRLPLM---SEPRTGEKGK 269

Query: 79  RHRK 82
           R R+
Sbjct: 270 RRRR 273


>gi|239754940 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 159

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 46/150 (30%), Positives = 52/150 (34%), Gaps = 36/150 (24%)

Query: 29  GGGAARGRRTGAAT-GGLC-------------------ASHPQARRCRRAAARVPALAPA 68
           GGGA R  R G    GG C                   A+HP A R R AAAR+ ALA A
Sbjct: 16  GGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALA-A 74

Query: 69  SLPREETKGSRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRCRPSLLPHTRSHAAAG 128
           + PR  + G +       G       +  P A       A P    P  LP   S     
Sbjct: 75  AQPRRRSPGPQ-------GGGGGDIASPLPPALQPRGAPAVPAAPSPGPLPARPSSPPPS 127

Query: 129 ALDREVGAIHPPRARAQSLLPRQVWNPPSP 158
                     PP   AQS LP   W P  P
Sbjct: 128 PPS-------PPVPTAQSSLPAP-WPPQGP 149


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 36.6 bits (83), Expect = 0.016
 Identities = 48/196 (24%), Positives = 73/196 (37%), Gaps = 23/196 (11%)

Query: 19   LQPPLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAARVPALAPASLPREETK-G 77
            L+ P+ P    G  A G        G+  + P+A+         P+   +  PR  TK G
Sbjct: 3665 LKFPVHPRKAVGSLAPGELARGTENGMKPATPKAKPG-------PSSQGSGSPRPGTKTG 3717

Query: 78   SRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRC-RPSLLPHTRSHAAAGALDREVGA 136
               + +   G+   +  TTP       A  + P R   P  LP      +     RE G 
Sbjct: 3718 GGSQPQPASGQLQSETATTP-------AKPSFPSRSPAPERLPARAQAKSCTKGPREAGE 3770

Query: 137  IHP-----PRARAQSLLPRQVWNPPSPLWSEEVYSTAPYYTSWARGPRCPPELCAPPLKR 191
              P     P+ + +S   R+    P P  SE V S     ++  + PR P +   P   R
Sbjct: 3771 QGPHGSLGPKEKGESSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATP--SR 3828

Query: 192  KEQTEPTPSVRFFPSP 207
               T+P P+ +  P P
Sbjct: 3829 VLPTKPKPNSQNKPRP 3844



 Score = 29.6 bits (65), Expect = 1.9
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 26/98 (26%)

Query: 3    SETQEQERGRQPHALRLQPPLRPELPGGGAARGRRTGAATGGLCAS-------------H 49
            S+ ++Q RG+Q   L+L    R +L  GGAA G  +G+  GG  +               
Sbjct: 940  SQGRQQRRGKQ---LKL---FRKDLDSGGAAEG--SGSGGGGRASGLRPRRNDGLGERPP 991

Query: 50   PQARRCRRAAARVPALAPASLPR-----EETKGSRHRK 82
            P+ RR R  A    A     +PR     EET+ SR R+
Sbjct: 992  PRPRRPRTQAPGSRADPAPRVPRAAALPEETRSSRRRR 1029


>gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens]
          Length = 888

 Score = 35.4 bits (80), Expect = 0.035
 Identities = 36/112 (32%), Positives = 42/112 (37%), Gaps = 12/112 (10%)

Query: 3   SETQEQERGRQPHALRLQPPLRPELP-GGGAAR---------GRRTGAATGGLCASHPQA 52
           S T E E G     L LQ  + PELP GGG  R         G  T A  G   A     
Sbjct: 739 SPTLEVELGSAE--LPLQGAVGPELPPGGGHGRAGSCPVDGDGPVTTAVAGAALAQDAFH 796

Query: 53  RRCRRAAARVPALAPASLPREETKGSRHRKRAVVGETHRKCVTTPPTARTEL 104
           R+     + VP   P            +  R VV E HR  V+ PP +  EL
Sbjct: 797 RKASSLDSAVPIAPPPRQACSSLGPVLNESRPVVCERHRVVVSYPPQSEAEL 848


>gi|149944526 additional sex combs like 3 [Homo sapiens]
          Length = 2248

 Score = 35.4 bits (80), Expect = 0.035
 Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 31/143 (21%)

Query: 14   PHALRLQPPLRPELPGG---GAARGRRTGAAT-GGLCASHPQARRCRRAAARVPALAPAS 69
            P  ++ QP  +PE         + GR TGA T   + A   QAR  R AAA     A AS
Sbjct: 1022 PFIIKSQPVSKPESRASTSTSVSGGRNTGARTLADIKARAQQARAQREAAAAAAVAAAAS 1081

Query: 70   LP-------------------REETKG---SRHRKRAVVGETHRKCVTTPPTARTELAVV 107
            +                    +E+TK    ++H+ RA + +T ++    PP +  E    
Sbjct: 1082 IVSGAMGSPGEGGKTRTLAHIKEQTKAKLFAKHQARAHLFQTSKETRLPPPLSSKE---- 1137

Query: 108  AAPRRCRPSLLPHTRSHAAAGAL 130
              P     S  P T+   + G +
Sbjct: 1138 -GPPNLEVSSTPETKMEGSTGVI 1159


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 35.0 bits (79), Expect = 0.045
 Identities = 51/199 (25%), Positives = 65/199 (32%), Gaps = 31/199 (15%)

Query: 20  QPPLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAARV--PALAPASLPREETKG 77
           + P R  L  G     R T   T G   S   ARR R A   V  P  AP++ PR  T+G
Sbjct: 140 EAPKRSALSAGAR---RDTSGPTPGT-PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEG 195

Query: 78  SRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRR---------CRPSLLPHTRSHAAAG 128
            R   ++V   +        P AR   +     +R           P   P     +A G
Sbjct: 196 PR---KSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARG 252

Query: 129 ALDREVGAIHPPRARAQSLLPRQVWNPPSPLWSEEVYSTAPYYTSWARGPRCPPELCAPP 188
                     P     Q+L P QV  P            AP     +  P   P   APP
Sbjct: 253 TPRAPAHPSQPKPKGLQALRPPQVTPPRK--------DAAPALGPLSSSPLATPSPSAPP 304

Query: 189 LKRKEQTEPTPSVRFFPSP 207
                     PS++  PSP
Sbjct: 305 -----SPSAPPSLQTLPSP 318



 Score = 34.3 bits (77), Expect = 0.077
 Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 12/119 (10%)

Query: 95  TTPPTARTELAVVAAPRRCRPSLLPHTRSHAAAGALDREVGAIHPPRARAQSLLPRQVWN 154
           T  P A   LAV        P   P  ++  +  A      +  PP     SL    +  
Sbjct: 383 TPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQV 442

Query: 155 PPSPLWSEEVYSTAPYYTSWARGPRCPPELCAPPL---KRKEQTEP---TPSVRFFPSP 207
           PPSP       ++ P   S    P+ PP L APPL   K   Q  P   TP ++  PSP
Sbjct: 443 PPSPP------ASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSP 495


>gi|14110407 heterogeneous nuclear ribonucleoprotein D-like [Homo
           sapiens]
          Length = 420

 Score = 34.7 bits (78), Expect = 0.059
 Identities = 35/132 (26%), Positives = 51/132 (38%), Gaps = 26/132 (19%)

Query: 14  PHALRLQPPLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAARVPALAPASLPRE 73
           P    + PPL P  P   A+R             SH + R  R+ A  +P+LAP+S    
Sbjct: 5   PRLSHVPPPLFPSAPATLASRS-----------LSHWRPRPPRQLAPLLPSLAPSS---- 49

Query: 74  ETKGSRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRCRPSLLPHTRSHAAAGALDRE 133
             +G+R  +R V  +         P+     A +   RR RP L    R H  + ++ R 
Sbjct: 50  ARQGARRAQRHVTAQ--------QPSRLAGGAAIKGGRRRRPDLF---RRHFKSSSIQRS 98

Query: 134 VGAIHPPRARAQ 145
             A    R   Q
Sbjct: 99  AAAAAATRTARQ 110


>gi|18702331 OTU domain containing 7A [Homo sapiens]
          Length = 926

 Score = 34.7 bits (78), Expect = 0.059
 Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 9/129 (6%)

Query: 26  ELPGGGAARGRRTGAATGGLCASHPQARRCRRAAARVPALAPASLPRE-----ETKGSRH 80
           E P  G A GR   AA GG  +    ARR   A+  VP  +P +  R+     +  G+R 
Sbjct: 723 ERPSPGPAAGRAARAAAGGTASPGGGARRA-SASGPVPGRSPPAPARQSVIHVQASGARD 781

Query: 81  RKRAVVGETHRKCVTTPPTARTELAVVAAPRRC---RPSLLPHTRSHAAAGALDREVGAI 137
              A      R C T P   R+  +   +P R    R      + + A  GAL    G  
Sbjct: 782 EACAPAVGALRPCATYPQQNRSLSSQSYSPARAAALRTVNTVESLARAVPGALPGAAGTA 841

Query: 138 HPPRARAQS 146
                ++Q+
Sbjct: 842 GAAEHKSQT 850


>gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo
           sapiens]
          Length = 834

 Score = 34.7 bits (78), Expect = 0.059
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 6/66 (9%)

Query: 94  VTTPPTARTELAVVAAP-RRCRPSLLPHTRSHAAAGALDREVGAIHPPRARAQSLLPRQV 152
           V  PP + ++L V     RR R  +LP     A+A  LD +     P +AR  S +P   
Sbjct: 572 VEPPPFSGSDLCVAGVSVRRARRQVLPVCNLKASASLLDAQ-----PLKARGPSAMPDPA 626

Query: 153 WNPPSP 158
             PPSP
Sbjct: 627 QGPPSP 632


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 34.3 bits (77), Expect = 0.077
 Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 12/119 (10%)

Query: 95  TTPPTARTELAVVAAPRRCRPSLLPHTRSHAAAGALDREVGAIHPPRARAQSLLPRQVWN 154
           T  P A   LAV        P   P  ++  +  A      +  PP     SL    +  
Sbjct: 422 TPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQV 481

Query: 155 PPSPLWSEEVYSTAPYYTSWARGPRCPPELCAPPL---KRKEQTEP---TPSVRFFPSP 207
           PPSP       ++ P   S    P+ PP L APPL   K   Q  P   TP ++  PSP
Sbjct: 482 PPSPP------ASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSP 534



 Score = 32.3 bits (72), Expect = 0.29
 Identities = 56/218 (25%), Positives = 76/218 (34%), Gaps = 39/218 (17%)

Query: 20  QPPLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAARV--PALAPASLPREETKG 77
           + P R  L  G     R T   T G   S   ARR R A   V  P  AP++ PR  T+G
Sbjct: 149 EAPKRSALSAGAR---RDTSGPTPGT-PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEG 204

Query: 78  SRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRR---------CRPSLLPHTRSHAAAG 128
            R   ++V   +        P AR   +     +R           P   P     +A G
Sbjct: 205 PR---KSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARG 261

Query: 129 ALDREVGAIHPPRARAQSLLPRQVWNPP--------SPLWSEEVYSTAPYYTSWARGPRC 180
                     P     Q+L P QV  PP         PL S  + + +P     ++ P  
Sbjct: 262 TPRAPAHPSQPKPKGLQALRPPQV-TPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPT 320

Query: 181 PP----------ELCAP-PLKRKEQTEPTPSVRFFPSP 207
            P          +L  P PL     + P PS++  PSP
Sbjct: 321 LPATPHSSSLTCQLATPLPLAPPSPSAP-PSLQTLPSP 357


>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 255

 Score = 34.3 bits (77), Expect = 0.077
 Identities = 35/93 (37%), Positives = 38/93 (40%), Gaps = 6/93 (6%)

Query: 28  PGGGA---ARGRRTGAATGGLCASHPQARRCRRAAARVPALAPASLPRE-ETKGSRH--R 81
           PGGGA   ARG    AA     A+     R    A R  ALA A LPR     G+R   R
Sbjct: 163 PGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMR 222

Query: 82  KRAVVGETHRKCVTTPPTARTELAVVAAPRRCR 114
           +R   GE        PP A    A    PRR R
Sbjct: 223 RRLGAGERPAPRPRGPPRAPARGARWLRPRRPR 255


>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
           sapiens]
          Length = 255

 Score = 34.3 bits (77), Expect = 0.077
 Identities = 35/93 (37%), Positives = 38/93 (40%), Gaps = 6/93 (6%)

Query: 28  PGGGA---ARGRRTGAATGGLCASHPQARRCRRAAARVPALAPASLPRE-ETKGSRH--R 81
           PGGGA   ARG    AA     A+     R    A R  ALA A LPR     G+R   R
Sbjct: 163 PGGGASPRARGGNAAAALAARQAAGGGRSRSAFVAGRDAALACAQLPRRPRGAGARRGMR 222

Query: 82  KRAVVGETHRKCVTTPPTARTELAVVAAPRRCR 114
           +R   GE        PP A    A    PRR R
Sbjct: 223 RRLGAGERPAPRPRGPPRAPARGARWLRPRRPR 255


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 59/210 (28%), Positives = 74/210 (35%), Gaps = 32/210 (15%)

Query: 20  QPPLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAARV--PALAPASLPREETKG 77
           + P R  L  G     R T   T G   S   ARR R A   V  P  AP++ PR  T+G
Sbjct: 149 EAPKRSALSAGAR---RDTSGPTPGT-PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEG 204

Query: 78  SRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRR---------CRPSLLPHTRSHAAAG 128
            R   ++V   +        P AR   +     +R           P   P     +A G
Sbjct: 205 PR---KSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARG 261

Query: 129 ALDREVGAIHPPRARAQSLLPRQVWNPP--------SPLWSEEVYSTAPYYTSWARGPRC 180
                     P     Q+L P QV  PP         PL S  + + +P  T  AR P  
Sbjct: 262 TPRAPAHPSQPKPKGLQALRPPQV-TPPRKDAAPALGPLSSSPLATPSPSGTK-AR-PVP 318

Query: 181 PPELCAPPLKRKEQTEP---TPSVRFFPSP 207
           PP+  A PL       P   TP     PSP
Sbjct: 319 PPDNAATPLPATLPPSPPLATPLPLAPPSP 348



 Score = 30.8 bits (68), Expect = 0.85
 Identities = 33/115 (28%), Positives = 43/115 (37%), Gaps = 13/115 (11%)

Query: 96  TPPTARTELAVVAAPRRCRPSLL--PHTRSHAAAGALDREVGAIHPPRARAQSLLPRQVW 153
           +PP +         P +  PSL   P     +   +      A  PP+A      P  + 
Sbjct: 678 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP-PLQ 736

Query: 154 NPPSPLWSEEVYSTAPYYTSWARGPRCPPELCAPPLKRKEQTEPTPSVRFFPSPL 208
            PPSP       ++ P   S    PR PP L APPL    Q  P+P      SPL
Sbjct: 737 VPPSPP------ASPPMSPSATPPPRVPPLLAAPPL----QVPPSPPASLPMSPL 781



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 3/74 (4%)

Query: 137 IHPPRARAQSLLPRQVWNPPSPLWS---EEVYSTAPYYTSWARGPRCPPELCAPPLKRKE 193
           I PP     SL P  +  PP+ L +   E + S AP     A  P   P L  PP     
Sbjct: 508 IMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPC 567

Query: 194 QTEPTPSVRFFPSP 207
             +  PS    P P
Sbjct: 568 PLQAPPSPLTTPPP 581


>gi|38569493 potassium voltage-gated channel, subfamily H
           (eag-related), member 3 [Homo sapiens]
          Length = 1083

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 99  TARTELAVVAAPRRCRPSLLPHTRSHAA-AGALDREVGAIHPPRARAQSLLPRQVWNPPS 157
           T+ +  A + +PRR  P      R     AGAL  E G   PPRA     LP   WN P 
Sbjct: 759 TSSSSAAKLLSPRRTAPRPRLGGRGRPGRAGALKAEAGPSAPPRALEGLRLPPMPWNVPP 818

Query: 158 PL 159
            L
Sbjct: 819 DL 820


>gi|113423021 PREDICTED: similar to hCG1820409 [Homo sapiens]
          Length = 578

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 19/134 (14%)

Query: 6   QEQERGRQPHALRLQPPLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAARVPAL 65
           +++E+ +QP AL L   L P LP  G   GR   A  GG      +       +AR P  
Sbjct: 85  EDEEKAQQPTALILGS-LPPRLPRRG---GRGDSAGGGGRDREAGRGEANPAHSARSP-- 138

Query: 66  APASLPREETKGSRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRCRPSLLPHTRSHA 125
                PR+   G++  + +    T R C          L V  +P  C P   P++   A
Sbjct: 139 ---ERPRKPEAGAQDFRDSE--RTDRDC--------QPLRVKDSPHPCPPPGAPNSLVSA 185

Query: 126 AAGALDREVGAIHP 139
           AA ALD    A+ P
Sbjct: 186 AARALDAGAAAMAP 199


>gi|113422497 PREDICTED: similar to hCG1820409 [Homo sapiens]
          Length = 578

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 39/134 (29%), Positives = 55/134 (41%), Gaps = 19/134 (14%)

Query: 6   QEQERGRQPHALRLQPPLRPELPGGGAARGRRTGAATGGLCASHPQARRCRRAAARVPAL 65
           +++E+ +QP AL L   L P LP  G   GR   A  GG      +       +AR P  
Sbjct: 85  EDEEKAQQPTALILGS-LPPRLPRRG---GRGDSAGGGGRDREAGRGEANPAHSARSP-- 138

Query: 66  APASLPREETKGSRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRCRPSLLPHTRSHA 125
                PR+   G++  + +    T R C          L V  +P  C P   P++   A
Sbjct: 139 ---ERPRKPEAGAQDFRDSE--RTDRDC--------QPLRVKDSPHPCPPPGAPNSLVSA 185

Query: 126 AAGALDREVGAIHP 139
           AA ALD    A+ P
Sbjct: 186 AARALDAGAAAMAP 199


>gi|239757099 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 208

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 40/133 (30%), Positives = 51/133 (38%), Gaps = 16/133 (12%)

Query: 81  RKRAVVGETHRKCVTTPPTA--------RTELAVVAAPRRCRPSLLPHTRSHAAA-GALD 131
           RK A   ET    V    TA        R +L    +P    P++  HTR  A   G   
Sbjct: 18  RKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPA---PTIRAHTRRKALGPGERG 74

Query: 132 REVGAIHPPRARAQSLLPRQVWNPPSPLWSEEVYSTAPYY--TSWARG--PRCPPELCAP 187
            E      PRARA +   R   +P  P  +    + AP +  T+  R   PR P     P
Sbjct: 75  PEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTP 134

Query: 188 PLKRKEQTEPTPS 200
           PL + E  EP  S
Sbjct: 135 PLGKSEPGEPETS 147


>gi|239751605 PREDICTED: hypothetical protein XP_002347934 [Homo
           sapiens]
          Length = 208

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 40/133 (30%), Positives = 51/133 (38%), Gaps = 16/133 (12%)

Query: 81  RKRAVVGETHRKCVTTPPTA--------RTELAVVAAPRRCRPSLLPHTRSHAAA-GALD 131
           RK A   ET    V    TA        R +L    +P    P++  HTR  A   G   
Sbjct: 18  RKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPA---PTIRAHTRRKALGPGERG 74

Query: 132 REVGAIHPPRARAQSLLPRQVWNPPSPLWSEEVYSTAPYY--TSWARG--PRCPPELCAP 187
            E      PRARA +   R   +P  P  +    + AP +  T+  R   PR P     P
Sbjct: 75  PEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTP 134

Query: 188 PLKRKEQTEPTPS 200
           PL + E  EP  S
Sbjct: 135 PLGKSEPGEPETS 147


>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 21/69 (30%)

Query: 29 GGGAARGRRTGAAT-GGLC-------------------ASHPQARRCRRAAARVPALAPA 68
          GGGA R  R G    GG C                   A+HP A R R AAAR+ ALA A
Sbjct: 16 GGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALA-A 74

Query: 69 SLPREETKG 77
          + PR  + G
Sbjct: 75 AQPRRRSPG 83


>gi|239746122 PREDICTED: hypothetical protein XP_002344202 [Homo
           sapiens]
          Length = 208

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 40/133 (30%), Positives = 51/133 (38%), Gaps = 16/133 (12%)

Query: 81  RKRAVVGETHRKCVTTPPTA--------RTELAVVAAPRRCRPSLLPHTRSHAAA-GALD 131
           RK A   ET    V    TA        R +L    +P    P++  HTR  A   G   
Sbjct: 18  RKDAKATETRESAVQRQGTAGHDLRKGHRKQLEDTGSPA---PTIRAHTRRKALGPGERG 74

Query: 132 REVGAIHPPRARAQSLLPRQVWNPPSPLWSEEVYSTAPYY--TSWARG--PRCPPELCAP 187
            E      PRARA +   R   +P  P  +    + AP +  T+  R   PR P     P
Sbjct: 75  PEASPRPAPRARAHAHSRRLPASPTGPPETRARLAWAPRFLPTNGRRPSPPRPPMSAPTP 134

Query: 188 PLKRKEQTEPTPS 200
           PL + E  EP  S
Sbjct: 135 PLGKSEPGEPETS 147


>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 285

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 21/69 (30%)

Query: 29 GGGAARGRRTGAAT-GGLC-------------------ASHPQARRCRRAAARVPALAPA 68
          GGGA R  R G    GG C                   A+HP A R R AAAR+ ALA A
Sbjct: 16 GGGAGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALA-A 74

Query: 69 SLPREETKG 77
          + PR  + G
Sbjct: 75 AQPRRRSPG 83


>gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens]
          Length = 315

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 2/98 (2%)

Query: 59  AARVPALAPASLPREETKGSRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRCRPSL- 117
           A R   LA  + P E    + H  +    E   K  TT   AR E + +  P R  P + 
Sbjct: 23  AERESLLARVNRPAEHQPLAEHEGKVAAREEKAKA-TTSEGARGEPSSLVVPTRSMPQVA 81

Query: 118 LPHTRSHAAAGALDREVGAIHPPRARAQSLLPRQVWNP 155
           +P T   AAAG  ++    +  P+    +  P Q  +P
Sbjct: 82  VPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSP 119


>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
          Length = 352

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 3/90 (3%)

Query: 41  ATGGLCASHPQARRCRRAAARVPALAPA-SLPREETKGSRHRKRAVVGETHRKCVTTPPT 99
           A GGL  S PQ  R R A A V +   + S  R   +GS  RK+    +T R C  +   
Sbjct: 108 ARGGL--SGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQ 165

Query: 100 ARTELAVVAAPRRCRPSLLPHTRSHAAAGA 129
            R       A  R +      TRS +++ +
Sbjct: 166 GRKASTAPGAEERSKQKARRRTRSSSSSSS 195


>gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens]
          Length = 315

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 2/98 (2%)

Query: 59  AARVPALAPASLPREETKGSRHRKRAVVGETHRKCVTTPPTARTELAVVAAPRRCRP-SL 117
           A R   LA  + P E    + H  +    E   K  TT   AR E + +  P R  P + 
Sbjct: 23  AERESLLARVNRPAEHQPLAEHEGKVAAREEKAKA-TTSEGARGEPSSLVVPTRSMPQAA 81

Query: 118 LPHTRSHAAAGALDREVGAIHPPRARAQSLLPRQVWNP 155
           +P T   AAAG  ++    +  P+    +  P Q  +P
Sbjct: 82  VPDTMEEAAAGPKEKRQPPLLLPKGNPWNKKPSQHLSP 119


>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 350

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 37/136 (27%), Positives = 48/136 (35%), Gaps = 19/136 (13%)

Query: 32  AARGRRTGAATGGLCASHPQARRCRRAAARVPALAPASLPREETKGSRHRKRAVVGETHR 91
           A  GRR     G    S P   R R    R P   P + P     G+R R ++  G    
Sbjct: 114 APTGRRWRRRPG---PSPPLQPRSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPG---- 166

Query: 92  KCVTTPPTARTELAVVAAPRRCRP-SLLPHTRSHAAAGALDREVGAIHPP--------RA 142
            C ++P  AR+     A P R  P    P    H       RE  ++ PP        RA
Sbjct: 167 -CRSSPFPARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRA 225

Query: 143 RAQSLLPRQVWNPPSP 158
             +   P+    PP P
Sbjct: 226 AGKGTTPQP--QPPPP 239


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,413,220
Number of Sequences: 37866
Number of extensions: 631303
Number of successful extensions: 3112
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 2959
Number of HSP's gapped (non-prelim): 340
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.