Guide to the Human Genome
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Name: TTLL8 Sequence: fasta or formatted (834aa) NCBI GI: 122937293
Description:

tubulin tyrosine ligase-like family, member 8

Referenced in:

Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         70           3
 C cysteine            3.4         28           1
 D aspartate           5.8         48           2
 E glutamate           5.4         45           2
 F phenylalanine       2.9         24           2
 G glycine             5.9         49           2
 H histidine           2.3         19           2
 I isoleucine          3.8         32           2
 K lysine              5.3         44           2
 L leucine             9.7         81           2
 M methionine          1.9         16           2
 N asparagine          3.0         25           2
 P proline             7.9         66           3
 Q glutamine           4.9         41           2
 R arginine            7.1         59           2
 S serine              7.2         60           2
 T threonine           4.4         37           2
 V valine              6.6         55           2
 W tryptophan          1.9         16           1
 Y tyrosine            2.3         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin tyrosine ligase-like family, member 8 [Homo... 
TTLL3                 0.258   tubulin tyrosine ligase-like family, member 3 [Homo...
TTLL5                 0.048   tubulin tyrosine ligase-like family, member 5 
TTLL1                 0.048   tubulin tyrosine ligase-like family, member 1 
TTLL10                0.044   tubulin tyrosine ligase-like family, member 10 isof...
TTLL2                 0.044   tubulin tyrosine ligase-like family, member 2 
TTLL9                 0.041   tubulin tyrosine ligase-like family, member 9 
TTLL4                 0.040   tubulin tyrosine ligase-like family, member 4 [Homo...
TTL                   0.036   tubulin tyrosine ligase 
TTLL13                0.031   tubulin tyrosine ligase-like family, member 13 [Homo...
TTLL7                 0.028   tubulin tyrosine ligase-like family, member 7 
TTLL6                 0.027   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL10                0.022   tubulin tyrosine ligase-like family, member 10 isof...
TTLL11                0.022   tubulin tyrosine ligase-like family, member 11 a [H...
TTLL12                0.011   tubulin tyrosine ligase-like family, member 12 [Homo...
TTLL11                0.010   tubulin tyrosine ligase-like family, member 11 b [Ho...
SMARCC2               0.008   SWI/SNF-related matrix-associated actin-dependent re...
TTLL6                 0.008   tubulin tyrosine ligase-like family, member 6 isofo...
MXRA7                 0.007   transmembrane anchor protein 1 isoform 3 
MXRA7                 0.007   transmembrane anchor protein 1 isoform 2 
MXRA7                 0.007   transmembrane anchor protein 1 isoform 1 
MYPOP                 0.007   Myb protein P42POP 
RERE                  0.007   atrophin-1 like protein isoform b 
RERE                  0.007   atrophin-1 like protein isoform a 
RERE                  0.007   atrophin-1 like protein isoform a 
BZRAP1                0.007   peripheral benzodiazepine receptor-associated prote...
BZRAP1                0.007   peripheral benzodiazepine receptor-associated prote...
SMARCD2               0.006   SWI/SNF-related matrix-associated actin-dependent r...
C11orf9               0.006   hypothetical protein LOC745 isoform 1 
C11orf9               0.006   hypothetical protein LOC745 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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