LOC441617 1225

Name: LOC441617	Sequence: fasta or formatted (578aa)		NCBI GI: 113423021
Description: PREDICTED: similar to hCG1820409		Referenced in: Leucine-rich Repeat Family
Other entries for this name: alt mRNA [578aa] PREDICTED: similar to hCG1820409 alt prot [339aa] PREDICTED: similar to hCG1820409
Composition: Amino acid Percentage Count Longest homopolymer A alanine 15.1 87 3 C cysteine 2.1 12 1 D aspartate 5.7 33 1 E glutamate 5.0 29 3 F phenylalanine 1.9 11 2 G glycine 11.4 66 6 H histidine 1.4 8 1 I isoleucine 1.4 8 1 K lysine 1.2 7 1 L leucine 15.1 87 3 M methionine 0.9 5 1 N asparagine 2.9 17 1 P proline 10.6 61 3 Q glutamine 2.9 17 2 R arginine 10.7 62 2 S serine 6.1 35 3 T threonine 1.2 7 1 V valine 3.1 18 2 W tryptophan 0.3 2 1 Y tyrosine 1.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1820409 LOC441617 1.000 PREDICTED: similar to hCG1820409 LOC441617 0.313 PREDICTED: similar to hCG1820409 TPBG 0.159 trophoblast glycoprotein CHADL 0.066 chondroadherin-like LRRC24 0.065 leucine rich repeat containing 24 LRRC26 0.064 leucine rich repeat containing 26 ISLR2 0.060 immunoglobulin superfamily containing leucine-rich ... ISLR2 0.060 immunoglobulin superfamily containing leucine-rich ... ISLR2 0.060 immunoglobulin superfamily containing leucine-rich r... ISLR2 0.060 immunoglobulin superfamily containing leucine-rich ... RTN4R 0.060 reticulon 4 receptor precursor GP5 0.054 glycoprotein V (platelet) VASN 0.052 slit-like 2 LRFN3 0.048 leucine rich repeat and fibronectin type III domain ... CPN2 0.048 carboxypeptidase N, polypeptide 2, 83kD RTN4RL2 0.048 reticulon 4 receptor-like 2 AMIGO1 0.048 AMIGO protein LRFN4 0.046 leucine rich repeat and fibronectin type III domain ... IGFALS 0.044 insulin-like growth factor binding protein, acid labi... LINGO4 0.043 leucine rich repeat and Ig domain containing 4 [Homo... SLIT1 0.042 slit homolog 1 LRRC4B 0.041 leucine rich repeat containing 4B KIAA0644 0.041 hypothetical protein LOC9865 LRRC55 0.040 leucine rich repeat containing 55 SLIT2 0.040 slit homolog 2 SLIT3 0.040 slit homolog 3 LRFN1 0.039 leucine rich repeat and fibronectin type III domain... IGFALS 0.039 insulin-like growth factor binding protein, acid la... ELFN2 0.039 leucine rich repeat containing 62 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.