LOC643355 7141

Name: LOC643355	Sequence: fasta or formatted (520aa)		NCBI GI: 169161145
Description: PREDICTED: hypothetical protein		Not currently referenced in the text
Other entries for this name: alt prot {426aa} PREDICTED: hypothetical protein alt mRNA {520aa} PREDICTED: hypothetical protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.5 60 3 C cysteine 1.0 5 1 D aspartate 1.0 5 1 E glutamate 5.4 28 2 F phenylalanine 2.1 11 1 G glycine 11.7 61 3 H histidine 2.5 13 1 I isoleucine 0.4 2 1 K lysine 1.3 7 1 L leucine 6.0 31 3 M methionine 0.4 2 1 N asparagine 0.8 4 1 P proline 15.6 81 3 Q glutamine 3.8 20 2 R arginine 14.8 77 4 S serine 11.3 59 2 T threonine 3.8 20 1 V valine 4.0 21 2 W tryptophan 1.7 9 1 Y tyrosine 0.8 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC643355 1.000 PREDICTED: hypothetical protein LOC643355 0.464 PREDICTED: hypothetical protein NACA 0.052 nascent polypeptide-associated complex alpha subuni... SRRM2 0.042 splicing coactivator subunit SRm300 ATN1 0.036 atrophin-1 ATN1 0.036 atrophin-1 SRRM1 0.035 serine/arginine repetitive matrix 1 FLJ22184 0.034 PREDICTED: hypothetical protein FLJ22184 FLJ37078 0.034 hypothetical protein LOC222183 WDR33 0.032 WD repeat domain 33 isoform 1 LOC100291624 0.032 PREDICTED: hypothetical protein XP_002345876 LOC100289712 0.032 PREDICTED: hypothetical protein XP_002346761 LOC100287455 0.032 PREDICTED: hypothetical protein XP_002342583 APC2 0.032 adenomatosis polyposis coli 2 FLJ22184 0.031 PREDICTED: hypothetical protein FLJ22184 KIF26A 0.031 kinesin family member 26A FLJ22184 0.031 PREDICTED: hypothetical protein LOC80164 LOC100286986 0.031 PREDICTED: hypothetical protein XP_002344191 SHANK1 0.031 SH3 and multiple ankyrin repeat domains 1 COL3A1 0.030 collagen type III alpha 1 preproprotein LOC100292122 0.030 PREDICTED: hypothetical protein XP_002345138 GGN 0.029 gametogenetin MYO15A 0.029 myosin XV C2orf55 0.029 hypothetical protein LOC343990 SNX26 0.028 sorting nexin 26 UNCX 0.028 UNC homeobox WIPF2 0.028 WIRE protein CASKIN2 0.028 cask-interacting protein 2 isoform b CASKIN2 0.028 cask-interacting protein 2 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.