Guide to the Human Genome
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Name: EEF1B2 Sequence: fasta or formatted (225aa) NCBI GI: 11136628
Description:

eukaryotic translation elongation factor 1 beta 2

Referenced in:

Small RNAs in RNA Processing
Translation Factors
tRNA Enzymes

Other entries for this name:
alt mRNA [225aa] eukaryotic translation elongation factor 1 beta 2
alt mRNA [225aa] eukaryotic translation elongation factor 1 beta 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         21           2
 C cysteine            1.3          3           1
 D aspartate          11.1         25           4
 E glutamate           8.9         20           3
 F phenylalanine       2.2          5           1
 G glycine             6.7         15           1
 H histidine           0.9          2           1
 I isoleucine          4.0          9           1
 K lysine              9.8         22           2
 L leucine             8.4         19           2
 M methionine          1.8          4           1
 N asparagine          1.3          3           1
 P proline             4.4         10           3
 Q glutamine           3.6          8           1
 R arginine            2.2          5           1
 S serine              8.0         18           2
 T threonine           2.7          6           2
 V valine              8.0         18           2
 W tryptophan          1.3          3           1
 Y tyrosine            4.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation elongation factor 1 beta 2 [H... 
EEF1B2                1.000   eukaryotic translation elongation factor 1 beta 2 [Ho...
EEF1B2                1.000   eukaryotic translation elongation factor 1 beta 2 [H...
EEF1D                 0.466   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.466   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.466   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.466   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.466   eukaryotic translation elongation factor 1 delta iso...
EEF1D                 0.466   eukaryotic translation elongation factor 1 delta iso...
EEF1D                 0.466   eukaryotic translation elongation factor 1 delta is...
CARS                  0.063   cysteinyl-tRNA synthetase isoform c 
LMOD3                 0.023   leiomodin 3 (fetal) 
HERC2                 0.019   hect domain and RLD 2 
DDX46                 0.019   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
FAM9A                 0.019   family with sequence similarity 9, member A 
YTHDC1                0.019   splicing factor YT521-B isoform 2 
YTHDC1                0.019   splicing factor YT521-B isoform 1 
CEBPZ                 0.019   CCAAT/enhancer binding protein zeta 
L3MBTL2               0.019   l(3)mbt-like 2 
NUCKS1                0.019   nuclear casein kinase and cyclin-dependent kinase su...
NCL                   0.019   nucleolin 
ATAD2                 0.019   ATPase family, AAA domain containing 2 
CYLC2                 0.019   cylicin 2 
DEK                   0.019   DEK oncogene isoform 2 
DEK                   0.019   DEK oncogene isoform 1 
RBM28                 0.016   RNA binding motif protein 28 
ANAPC4                0.016   anaphase-promoting complex subunit 4 
BSN                   0.016   bassoon protein 
GOLIM4                0.016   golgi integral membrane protein 4 
TAF1L                 0.016   TBP-associated factor RNA polymerase 1-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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