DEK 11544

Name: DEK	Sequence: fasta or formatted (341aa)		NCBI GI: 197927454
Description: DEK oncogene isoform 2		Referenced in: Nonhistone Chromosomal Proteins
Other entries for this name: alt prot [375aa] DEK oncogene isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 14 2 C cysteine 1.5 5 1 D aspartate 5.3 18 2 E glutamate 15.5 53 7 F phenylalanine 2.3 8 2 G glycine 3.8 13 1 H histidine 0.9 3 1 I isoleucine 2.9 10 1 K lysine 18.2 62 3 L leucine 7.0 24 2 M methionine 2.1 7 1 N asparagine 3.8 13 1 P proline 5.9 20 2 Q glutamine 2.1 7 1 R arginine 3.5 12 1 S serine 11.4 39 3 T threonine 5.0 17 2 V valine 3.2 11 1 W tryptophan 0.0 0 0 Y tyrosine 1.5 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DEK oncogene isoform 2 DEK 0.972 DEK oncogene isoform 1 CYLC2 0.054 cylicin 2 ATRX 0.054 transcriptional regulator ATRX isoform 2 ATRX 0.054 transcriptional regulator ATRX isoform 1 RBM25 0.052 RNA binding motif protein 25 CYLC1 0.049 cylicin, basic protein of sperm head cytoskeleton 1... TRDN 0.049 triadin FAM133A 0.049 hypothetical protein LOC286499 CALD1 0.049 caldesmon 1 isoform 1 WDR87 0.048 NYD-SP11 protein NEFM 0.046 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.046 neurofilament, medium polypeptide 150kDa isoform 2 ... MAP1B 0.046 microtubule-associated protein 1B EIF5B 0.046 eukaryotic translation initiation factor 5B ANKRD12 0.046 ankyrin repeat domain 12 isoform 2 ANKRD12 0.046 ankyrin repeat domain 12 isoform 1 LOC100294088 0.046 PREDICTED: hypothetical protein, partial SETD1A 0.046 SET domain containing 1A NKAP 0.045 NFKB activating protein SRRT 0.045 arsenate resistance protein 2 isoform d SRRT 0.045 arsenate resistance protein 2 isoform a SFRS11 0.045 splicing factor, arginine/serine-rich 11 LYAR 0.045 Ly1 antibody reactive homolog LYAR 0.045 Ly1 antibody reactive homolog EIF3CL 0.045 eukaryotic translation initiation factor 3, subunit... RTF1 0.045 Paf1/RNA polymerase II complex component EIF3C 0.045 eukaryotic translation initiation factor 3, subunit ... EIF3C 0.045 eukaryotic translation initiation factor 3, subunit C... SR140 0.043 U2-associated SR140 protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.