Guide to the Human Genome
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Name: GOLIM4 Sequence: fasta or formatted (696aa) NCBI GI: 7657138
Description:

golgi integral membrane protein 4

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         53           3
 C cysteine            0.1          1           1
 D aspartate           5.6         39           2
 E glutamate          18.7        130           8
 F phenylalanine       1.3          9           1
 G glycine             3.6         25           1
 H histidine           4.7         33           1
 I isoleucine          1.1          8           1
 K lysine              5.9         41           2
 L leucine             7.9         55           4
 M methionine          1.4         10           1
 N asparagine          4.7         33           2
 P proline             3.7         26           2
 Q glutamine          13.1         91           5
 R arginine            6.5         45           2
 S serine              3.3         23           1
 T threonine           2.7         19           1
 V valine              4.9         34           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.7         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   golgi integral membrane protein 4 
TCHH                  0.076   trichohyalin 
LOC283685             0.067   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283685             0.066   PREDICTED: golgi autoantigen, golgin subfamily a-li...
RPGR                  0.064   retinitis pigmentosa GTPase regulator isoform C [Hom...
LOC727832             0.059   golgi autoantigen, golgin subfamily a-like 
PLEC1                 0.052   plectin 1 isoform 11 
PLEC1                 0.052   plectin 1 isoform 10 
PLEC1                 0.052   plectin 1 isoform 8 
PLEC1                 0.052   plectin 1 isoform 7 
PLEC1                 0.052   plectin 1 isoform 6 
PLEC1                 0.052   plectin 1 isoform 3 
PLEC1                 0.052   plectin 1 isoform 2 
PLEC1                 0.052   plectin 1 isoform 1 
LOC100286959          0.051   PREDICTED: hypothetical protein XP_002343921 
LOC645202             0.050   PREDICTED: hypothetical protein LOC645202 
LOC100133758          0.049   PREDICTED: hypothetical protein, partial 
LOC283767             0.048   golgi autoantigen, golgin subfamily a-like 
MYH11                 0.048   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.048   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
LOC440243             0.047   PREDICTED: Putative golgin subfamily A member 6-lik...
IVL                   0.047   involucrin 
ZNF853                0.047   zinc finger protein 853 
CEP250                0.047   centrosomal protein 2 
MYH14                 0.045   myosin, heavy chain 14 isoform 1 
MYH14                 0.045   myosin, heavy chain 14 isoform 2 
MYH14                 0.045   myosin, heavy chain 14 isoform 3 
NUMA1                 0.045   nuclear mitotic apparatus protein 1 
CGNL1                 0.045   cingulin-like 1 
MYH11                 0.044   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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