HERC2 2833

Name: HERC2	Sequence: fasta or formatted (4834aa)		NCBI GI: 126032348
Description: hect domain and RLD 2		Referenced in: Ran and Rag Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 379 3 C cysteine 2.4 116 2 D aspartate 5.8 281 3 E glutamate 6.2 298 4 F phenylalanine 2.6 128 2 G glycine 8.2 396 3 H histidine 2.5 122 2 I isoleucine 4.5 219 2 K lysine 5.0 241 2 L leucine 11.3 547 4 M methionine 1.8 85 2 N asparagine 2.8 133 2 P proline 4.8 234 3 Q glutamine 4.4 214 2 R arginine 5.3 255 4 S serine 8.5 413 4 T threonine 5.3 254 3 V valine 7.3 354 3 W tryptophan 1.6 78 1 Y tyrosine 1.8 87 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hect domain and RLD 2 HERC1 0.068 guanine nucleotide exchange factor p532 LOC390561 0.063 PREDICTED: similar to hect domain and RLD 2 LOC100290629 0.063 PREDICTED: hypothetical protein XP_002347563 LOC390561 0.063 PREDICTED: similar to hect domain and RLD 2 HERC4 0.017 hect domain and RLD 4 isoform b HERC4 0.017 hect domain and RLD 4 isoform a HECTD3 0.017 HECT domain containing 3 HERC3 0.016 hect domain and RLD 3 LOC100289574 0.015 PREDICTED: hypothetical protein XP_002343479 C12orf51 0.014 chromosome 12 open reading frame 51 HERC6 0.013 hect domain and RLD 6 RCBTB2 0.013 regulator of chromosome condensation and BTB domain c... NEK8 0.013 NIMA-related kinase 8 RCBTB1 0.012 regulator of chromosome condensation (RCC1) and BTB ... HERC5 0.012 hect domain and RLD 5 ITCH 0.012 itchy homolog E3 ubiquitin protein ligase NEK9 0.012 NIMA-related kinase 9 SMURF2 0.011 SMAD specific E3 ubiquitin protein ligase 2 WWP1 0.011 WW domain containing E3 ubiquitin protein ligase 1 [... SERGEF 0.011 deafness locus associated putative guanine nucleotide... HUWE1 0.011 HECT, UBA and WWE domain containing 1 HACE1 0.011 HECT domain and ankyrin repeat containing, E3 ubiqu... RCC2 0.011 regulator of chromosome condensation 2 RCC2 0.011 regulator of chromosome condensation 2 RPGR 0.011 retinitis pigmentosa GTPase regulator isoform A [Homo... RPGR 0.011 retinitis pigmentosa GTPase regulator isoform C [Hom... SMURF1 0.011 Smad ubiquitination regulatory factor 1 isoform 1 [H... SMURF1 0.011 Smad ubiquitination regulatory factor 1 isoform 2 [H... WWP2 0.011 WW domain containing E3 ubiquitin protein ligase 2 i... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.