Guide to the Human Genome
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Name: L3MBTL2 Sequence: fasta or formatted (705aa) NCBI GI: 20149698
Description:

l(3)mbt-like 2

Referenced in:

Additional Genes in Development

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         44           2
 C cysteine            2.6         18           1
 D aspartate           6.5         46           3
 E glutamate           7.2         51           4
 F phenylalanine       3.7         26           2
 G glycine             7.0         49           2
 H histidine           2.8         20           2
 I isoleucine          4.0         28           2
 K lysine              7.8         55           5
 L leucine             7.8         55           2
 M methionine          2.6         18           1
 N asparagine          2.1         15           1
 P proline             6.7         47           2
 Q glutamine           2.4         17           1
 R arginine            5.1         36           2
 S serine              8.5         60           3
 T threonine           4.4         31           1
 V valine              7.2         51           2
 W tryptophan          2.3         16           1
 Y tyrosine            3.1         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   l(3)mbt-like 2 
MBTD1                 0.471   mbt domain containing 1 
SFMBT2                0.156   Scm-like with four mbt domains 2 
SFMBT1                0.149   Scm-like with four mbt domains 1 
SFMBT1                0.149   Scm-like with four mbt domains 1 
SFMBT1                0.149   Scm-like with four mbt domains 1 
L3MBTL                0.116   l(3)mbt-like isoform I 
L3MBTL                0.116   l(3)mbt-like isoform II 
L3MBTL4               0.113   l(3)mbt-like 4 
L3MBTL3               0.109   l(3)mbt-like 3 isoform b 
L3MBTL3               0.109   l(3)mbt-like 3 isoform a 
SCML2                 0.073   sex comb on midleg-like 2 
SCMH1                 0.072   sex comb on midleg 1 isoform 1 
SCMH1                 0.072   sex comb on midleg 1 isoform 2 
PHC3                  0.014   polyhomeotic like 3 
TCOF1                 0.014   Treacher Collins-Franceschetti syndrome 1 isoform e...
TCOF1                 0.014   Treacher Collins-Franceschetti syndrome 1 isoform d...
TCOF1                 0.014   Treacher Collins-Franceschetti syndrome 1 isoform a ...
TCOF1                 0.014   Treacher Collins-Franceschetti syndrome 1 isoform c ...
LIFR                  0.008   leukemia inhibitory factor receptor precursor 
LIFR                  0.008   leukemia inhibitory factor receptor precursor [Homo...
PHF20L1               0.007   PHD finger protein 20-like 1 isoform 3 
PHF20L1               0.007   PHD finger protein 20-like 1 isoform 2 
PHF20L1               0.007   PHD finger protein 20-like 1 isoform 1 
PHIP                  0.007   pleckstrin homology domain interacting protein [Homo...
DAXX                  0.007   death-domain associated protein isoform a 
DAXX                  0.007   death-domain associated protein isoform a 
DAXX                  0.007   death-domain associated protein isoform b 
TACC2                 0.006   transforming, acidic coiled-coil containing protein...
TACC2                 0.006   transforming, acidic coiled-coil containing protein ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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