Guide to the Human Genome
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Name: ANAPC4 Sequence: fasta or formatted (808aa) NCBI GI: 41327749
Description:

anaphase-promoting complex subunit 4

Referenced in:

Anaphase-promoting Complex
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         46           3
 C cysteine            1.7         14           1
 D aspartate           5.0         40           3
 E glutamate           8.5         69           4
 F phenylalanine       4.8         39           2
 G glycine             4.0         32           2
 H histidine           2.1         17           1
 I isoleucine          4.7         38           2
 K lysine              6.3         51           2
 L leucine            12.6        102           3
 M methionine          2.6         21           1
 N asparagine          4.2         34           2
 P proline             3.6         29           2
 Q glutamine           3.6         29           2
 R arginine            4.3         35           2
 S serine              9.4         76           2
 T threonine           5.6         45           3
 V valine              6.4         52           2
 W tryptophan          1.5         12           1
 Y tyrosine            3.3         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   anaphase-promoting complex subunit 4 
STAT3                 0.006   signal transducer and activator of transcription 3 i...
STAT3                 0.006   signal transducer and activator of transcription 3 i...
STAT3                 0.006   signal transducer and activator of transcription 3 i...
TTBK1                 0.005   tau tubulin kinase 1 
SHROOM4               0.005   shroom family member 4 
KIF21A                0.005   kinesin family member 21A 
IFT80                 0.005   WD repeat domain 56 
XPO1                  0.004   exportin 1 
LOC727838             0.004   PREDICTED: similar to cancer/testis antigen family ...
TBL1Y                 0.004   transducin beta-like 1Y 
TBL1Y                 0.004   transducin beta-like 1Y 
TBL1Y                 0.004   transducin beta-like 1Y 
EEF1B2                0.004   eukaryotic translation elongation factor 1 beta 2 [H...
TTC3                  0.004   tetratricopeptide repeat domain 3 
EEF1B2                0.004   eukaryotic translation elongation factor 1 beta 2 [Ho...
EEF1B2                0.004   eukaryotic translation elongation factor 1 beta 2 [H...
TTC3                  0.004   tetratricopeptide repeat domain 3 
CSTF1                 0.004   cleavage stimulation factor subunit 1 
CSTF1                 0.004   cleavage stimulation factor subunit 1 
CSTF1                 0.004   cleavage stimulation factor subunit 1 
MYST4                 0.004   MYST histone acetyltransferase (monocytic leukemia)...
APOB48R               0.004   apolipoprotein B48 receptor 
GNL2                  0.004   guanine nucleotide binding protein-like 2 (nucleolar)...
AKAP9                 0.004   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.004   A-kinase anchor protein 9 isoform 3 
PRPF19                0.004   PRP19/PSO4 pre-mRNA processing factor 19 homolog [Hom...
RANGAP1               0.004   Ran GTPase activating protein 1 
KIAA1468              0.004   hypothetical protein LOC57614 
LOC728792             0.004   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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