Guide to the Human Genome
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Name: EEF1D Sequence: fasta or formatted (281aa) NCBI GI: 194239727
Description:

eukaryotic translation elongation factor 1 delta isoform 2

Referenced in:

Translation Factors

Other entries for this name:
alt prot [647aa] eukaryotic translation elongation factor 1 delta isoform 1
alt prot [646aa] eukaryotic translation elongation factor 1 delta isoform 3
alt prot [257aa] eukaryotic translation elongation factor 1 delta isoform 4
alt mRNA [281aa] eukaryotic translation elongation factor 1 delta isoform 2
alt mRNA [281aa] eukaryotic translation elongation factor 1 delta isoform 2
alt prot [647aa] eukaryotic translation elongation factor 1 delta isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         29           2
 C cysteine            0.7          2           1
 D aspartate           7.8         22           3
 E glutamate          10.3         29           3
 F phenylalanine       2.5          7           1
 G glycine             6.0         17           1
 H histidine           1.8          5           1
 I isoleucine          5.0         14           1
 K lysine              7.1         20           2
 L leucine             8.2         23           2
 M methionine          1.4          4           1
 N asparagine          2.8          8           1
 P proline             4.3         12           2
 Q glutamine           6.0         17           2
 R arginine            5.7         16           2
 S serine              7.1         20           2
 T threonine           2.8          8           1
 V valine              7.5         21           2
 W tryptophan          1.1          3           1
 Y tyrosine            1.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation elongation factor 1 delta is... 
EEF1D                 1.000   eukaryotic translation elongation factor 1 delta is...
EEF1D                 1.000   eukaryotic translation elongation factor 1 delta is...
EEF1D                 1.000   eukaryotic translation elongation factor 1 delta is...
EEF1D                 1.000   eukaryotic translation elongation factor 1 delta iso...
EEF1D                 1.000   eukaryotic translation elongation factor 1 delta iso...
EEF1D                 0.892   eukaryotic translation elongation factor 1 delta is...
EEF1B2                0.377   eukaryotic translation elongation factor 1 beta 2 [H...
EEF1B2                0.377   eukaryotic translation elongation factor 1 beta 2 [Ho...
EEF1B2                0.377   eukaryotic translation elongation factor 1 beta 2 [H...
CARD10                0.036   caspase recruitment domain protein 10 
AP3B1                 0.028   adaptor-related protein complex 3, beta 1 subunit [H...
NCL                   0.027   nucleolin 
AKAP9                 0.025   A-kinase anchor protein 9 isoform 2 
CGNL1                 0.025   cingulin-like 1 
CEP250                0.023   centrosomal protein 2 
MAML1                 0.021   mastermind-like 1 
DST                   0.021   dystonin isoform 1e precursor 
KLC3                  0.019   kinesin light chain 3 
CCDC48                0.017   coiled-coil domain containing 48 
PLEC1                 0.017   plectin 1 isoform 11 
PLEC1                 0.017   plectin 1 isoform 10 
PLEC1                 0.017   plectin 1 isoform 8 
PLEC1                 0.017   plectin 1 isoform 7 
PLEC1                 0.017   plectin 1 isoform 6 
PLEC1                 0.017   plectin 1 isoform 3 
PLEC1                 0.017   plectin 1 isoform 2 
PLEC1                 0.017   plectin 1 isoform 1 
CDC2L2                0.017   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.017   cell division cycle 2-like 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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