Guide to the Human Genome
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Name: FAM9A Sequence: fasta or formatted (332aa) NCBI GI: 28274705
Description:

family with sequence similarity 9, member A

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.9         46           6
 C cysteine            0.6          2           1
 D aspartate           4.2         14           2
 E glutamate          22.6         75          14
 F phenylalanine       1.2          4           1
 G glycine             6.6         22           5
 H histidine           1.8          6           1
 I isoleucine          3.6         12           2
 K lysine             11.1         37           3
 L leucine             4.5         15           2
 M methionine          1.5          5           1
 N asparagine          1.8          6           1
 P proline             3.0         10           1
 Q glutamine           4.5         15           2
 R arginine            6.6         22           1
 S serine              2.7          9           3
 T threonine           4.5         15           1
 V valine              3.3         11           2
 W tryptophan          0.6          2           1
 Y tyrosine            1.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 9, member A 
FAM9B                 0.275   family with sequence similarity 9, member B 
FAM9C                 0.203   family with sequence similarity 9, member C 
MYT1                  0.080   myelin transcription factor 1 
CENPB                 0.080   centromere protein B 
CDC2L2                0.078   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.078   cell division cycle 2-like 2 isoform 1 
NEFM                  0.078   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.078   neurofilament, medium polypeptide 150kDa isoform 2 ...
CDC2L1                0.078   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.078   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.078   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.078   cell division cycle 2-like 1 (PITSLRE proteins) isof...
LOC100133758          0.075   PREDICTED: hypothetical protein, partial 
CDC2L1                0.073   cell division cycle 2-like 1 (PITSLRE proteins) isof...
RPGR                  0.072   retinitis pigmentosa GTPase regulator isoform C [Hom...
NEFL                  0.070   neurofilament, light polypeptide 68kDa 
MYST4                 0.065   MYST histone acetyltransferase (monocytic leukemia)...
PELP1                 0.065   proline, glutamic acid and leucine rich protein 1 [...
WDR87                 0.064   NYD-SP11 protein 
MDN1                  0.064   MDN1, midasin homolog 
LOC728792             0.062   PREDICTED: hypothetical protein 
EIF5B                 0.061   eukaryotic translation initiation factor 5B 
YTHDC1                0.061   splicing factor YT521-B isoform 2 
YTHDC1                0.061   splicing factor YT521-B isoform 1 
SMTNL1                0.059   smoothelin-like 1 
CDC2L1                0.059   cell division cycle 2-like 1 (PITSLRE proteins) isof...
MYT1L                 0.059   myelin transcription factor 1-like 
DCAF8L2               0.058   DDB1 and CUL4 associated factor 8-like 2 
C12orf12              0.058   hypothetical protein LOC196477 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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