TAF1L 23820

Name: TAF1L	Sequence: fasta or formatted (1826aa)		NCBI GI: 24429572
Description: TBP-associated factor RNA polymerase 1-like		Referenced in: Bromodomain Family RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 97 3 C cysteine 1.5 27 2 D aspartate 7.3 134 4 E glutamate 9.6 176 3 F phenylalanine 3.3 61 2 G glycine 6.0 110 3 H histidine 2.3 42 2 I isoleucine 4.9 90 2 K lysine 8.0 146 3 L leucine 8.2 150 3 M methionine 2.8 51 2 N asparagine 3.3 61 2 P proline 6.5 118 7 Q glutamine 4.6 84 2 R arginine 5.3 97 3 S serine 7.1 130 2 T threonine 4.9 89 2 V valine 5.0 91 2 W tryptophan 1.1 20 2 Y tyrosine 2.8 52 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TBP-associated factor RNA polymerase 1-like TAF1 0.921 TBP-associated factor 1 isoform 1 TAF1 0.909 TBP-associated factor 1 isoform 2 PBRM1 0.015 polybromo 1 isoform 1 PBRM1 0.015 polybromo 1 isoform 2 PBRM1 0.015 polybromo 1 isoform 4 CECR2 0.014 cat eye syndrome chromosome region, candidate 2 [Ho... KAT2A 0.013 general control of amino acid synthesis 5-like 2 [H... BRD3 0.012 bromodomain containing protein 3 ZMYND8 0.011 zinc finger, MYND-type containing 8 isoform c ZMYND8 0.011 zinc finger, MYND-type containing 8 isoform a ZMYND8 0.011 zinc finger, MYND-type containing 8 isoform b KAT2B 0.011 K(lysine) acetyltransferase 2B BRD2 0.011 bromodomain containing 2 BRD2 0.011 bromodomain containing 2 BAZ2B 0.011 bromodomain adjacent to zinc finger domain, 2B [Homo... BRDT 0.010 testis-specific bromodomain protein BRDT 0.010 testis-specific bromodomain protein BRD4 0.010 bromodomain-containing protein 4 isoform short BRD4 0.010 bromodomain-containing protein 4 isoform long BAZ1A 0.010 bromodomain adjacent to zinc finger domain, 1A isofo... BAZ1A 0.010 bromodomain adjacent to zinc finger domain, 1A isofo... BRPF3 0.010 bromodomain and PHD finger containing, 3 BRD1 0.009 bromodomain containing protein 1 CREBBP 0.009 CREB binding protein isoform b CREBBP 0.009 CREB binding protein isoform a BPTF 0.009 bromodomain PHD finger transcription factor isoform ... BPTF 0.009 bromodomain PHD finger transcription factor isoform ... PHIP 0.009 pleckstrin homology domain interacting protein [Homo... EP300 0.009 E1A binding protein p300 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.