Guide to the Human Genome
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Name: EEF1D Sequence: fasta or formatted (647aa) NCBI GI: 194239723
Description:

eukaryotic translation elongation factor 1 delta isoform 1

Referenced in:

Translation Factors

Other entries for this name:
alt prot [646aa] eukaryotic translation elongation factor 1 delta isoform 3
alt prot [281aa] eukaryotic translation elongation factor 1 delta isoform 2
alt prot [257aa] eukaryotic translation elongation factor 1 delta isoform 4
alt prot [281aa] eukaryotic translation elongation factor 1 delta isoform 2
alt prot [281aa] eukaryotic translation elongation factor 1 delta isoform 2
alt mRNA [647aa] eukaryotic translation elongation factor 1 delta isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.4         80           3
 C cysteine            1.2          8           1
 D aspartate           6.6         43           3
 E glutamate           8.5         55           3
 F phenylalanine       2.2         14           1
 G glycine             7.1         46           2
 H histidine           2.3         15           2
 I isoleucine          2.5         16           1
 K lysine              5.9         38           2
 L leucine             8.8         57           3
 M methionine          0.9          6           1
 N asparagine          2.5         16           1
 P proline             6.5         42           2
 Q glutamine           5.7         37           2
 R arginine            7.9         51           2
 S serine              7.3         47           2
 T threonine           2.3         15           1
 V valine              5.6         36           2
 W tryptophan          2.0         13           1
 Y tyrosine            1.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation elongation factor 1 delta is... 
EEF1D                 1.000   eukaryotic translation elongation factor 1 delta iso...
EEF1D                 0.994   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.412   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.412   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.412   eukaryotic translation elongation factor 1 delta iso...
EEF1D                 0.368   eukaryotic translation elongation factor 1 delta is...
EEF1B2                0.155   eukaryotic translation elongation factor 1 beta 2 [H...
EEF1B2                0.155   eukaryotic translation elongation factor 1 beta 2 [Ho...
EEF1B2                0.155   eukaryotic translation elongation factor 1 beta 2 [H...
CARD10                0.015   caspase recruitment domain protein 10 
SFRS8                 0.013   splicing factor, arginine/serine-rich 8 
AP3B1                 0.012   adaptor-related protein complex 3, beta 1 subunit [H...
NCL                   0.011   nucleolin 
AKAP12                0.010   A kinase (PRKA) anchor protein 12 isoform 1 
AKAP12                0.010   A kinase (PRKA) anchor protein 12 isoform 2 
AKAP9                 0.010   A-kinase anchor protein 9 isoform 2 
CGNL1                 0.010   cingulin-like 1 
MDN1                  0.009   MDN1, midasin homolog 
CEP250                0.009   centrosomal protein 2 
AMH                   0.009   anti-Mullerian hormone 
MYH3                  0.009   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MAML1                 0.009   mastermind-like 1 
DST                   0.009   dystonin isoform 1e precursor 
KLC3                  0.008   kinesin light chain 3 
PLEC1                 0.008   plectin 1 isoform 11 
PLEC1                 0.008   plectin 1 isoform 10 
PLEC1                 0.008   plectin 1 isoform 8 
PLEC1                 0.008   plectin 1 isoform 7 
PLEC1                 0.008   plectin 1 isoform 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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