Guide to the Human Genome
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Name: EEF1D Sequence: fasta or formatted (257aa) NCBI GI: 194239729
Description:

eukaryotic translation elongation factor 1 delta isoform 4

Referenced in:

Translation Factors

Other entries for this name:
alt prot [647aa] eukaryotic translation elongation factor 1 delta isoform 1
alt prot [646aa] eukaryotic translation elongation factor 1 delta isoform 3
alt prot [281aa] eukaryotic translation elongation factor 1 delta isoform 2
alt prot [281aa] eukaryotic translation elongation factor 1 delta isoform 2
alt prot [281aa] eukaryotic translation elongation factor 1 delta isoform 2
alt prot [647aa] eukaryotic translation elongation factor 1 delta isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         25           2
 C cysteine            0.8          2           1
 D aspartate           8.2         21           3
 E glutamate          10.5         27           3
 F phenylalanine       2.7          7           1
 G glycine             5.8         15           1
 H histidine           1.9          5           1
 I isoleucine          4.3         11           1
 K lysine              7.4         19           2
 L leucine             8.2         21           2
 M methionine          1.6          4           1
 N asparagine          2.3          6           1
 P proline             4.7         12           2
 Q glutamine           6.2         16           2
 R arginine            5.1         13           2
 S serine              7.0         18           2
 T threonine           3.1          8           1
 V valine              7.8         20           2
 W tryptophan          1.2          3           1
 Y tyrosine            1.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation elongation factor 1 delta is... 
EEF1D                 0.973   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.973   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.973   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.973   eukaryotic translation elongation factor 1 delta is...
EEF1D                 0.973   eukaryotic translation elongation factor 1 delta iso...
EEF1D                 0.973   eukaryotic translation elongation factor 1 delta iso...
EEF1B2                0.411   eukaryotic translation elongation factor 1 beta 2 [H...
EEF1B2                0.411   eukaryotic translation elongation factor 1 beta 2 [Ho...
EEF1B2                0.411   eukaryotic translation elongation factor 1 beta 2 [H...
CARD10                0.035   caspase recruitment domain protein 10 
NCL                   0.029   nucleolin 
MAP4K4                0.029   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.029   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.029   mitogen-activated protein kinase kinase kinase kinas...
AKAP9                 0.027   A-kinase anchor protein 9 isoform 2 
AP3B1                 0.023   adaptor-related protein complex 3, beta 1 subunit [H...
DST                   0.023   dystonin isoform 1e precursor 
CGNL1                 0.023   cingulin-like 1 
KLC3                  0.021   kinesin light chain 3 
CCDC48                0.021   coiled-coil domain containing 48 
CBL                   0.019   Cas-Br-M (murine) ecotropic retroviral transforming ...
DIXDC1                0.019   DIX domain containing 1 isoform b 
DIXDC1                0.019   DIX domain containing 1 isoform a 
CDC2L2                0.019   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.019   cell division cycle 2-like 2 isoform 1 
CASZ1                 0.019   castor homolog 1, zinc finger isoform a 
USP8                  0.019   ubiquitin specific peptidase 8 
USP8                  0.019   ubiquitin specific peptidase 8 
USP8                  0.019   ubiquitin specific peptidase 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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