CYLC2 29914

Name: CYLC2	Sequence: fasta or formatted (348aa)		NCBI GI: 4557509
Description: cylicin 2		Referenced in: Protein Composition and Structure Testes and Sperm
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 26 2 C cysteine 0.0 0 0 D aspartate 12.4 43 2 E glutamate 8.3 29 2 F phenylalanine 1.1 4 1 G glycine 6.3 22 2 H histidine 0.3 1 1 I isoleucine 2.6 9 2 K lysine 26.4 92 3 L leucine 3.4 12 2 M methionine 0.9 3 1 N asparagine 2.6 9 1 P proline 3.4 12 1 Q glutamine 3.2 11 2 R arginine 4.3 15 2 S serine 8.9 31 2 T threonine 4.0 14 2 V valine 2.6 9 1 W tryptophan 0.6 2 1 Y tyrosine 1.1 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cylicin 2 CYLC1 0.230 cylicin, basic protein of sperm head cytoskeleton 1... LOC100133599 0.093 PREDICTED: hypothetical protein EIF5B 0.092 eukaryotic translation initiation factor 5B NSBP1 0.089 nucleosomal binding protein 1 MAP1B 0.089 microtubule-associated protein 1B TRDN 0.087 triadin PRPF38B 0.086 PRP38 pre-mRNA processing factor 38 (yeast) domain ... SMTNL1 0.083 smoothelin-like 1 LOC100133599 0.081 PREDICTED: hypothetical protein FAM133A 0.081 hypothetical protein LOC286499 NEFH 0.080 neurofilament, heavy polypeptide 200kDa NEFM 0.080 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.080 neurofilament, medium polypeptide 150kDa isoform 2 ... SFRS12 0.080 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.080 splicing factor, arginine/serine-rich 12 isoform b [... FAM133B 0.078 hypothetical protein LOC257415 isoform 2 FAM133B 0.078 hypothetical protein LOC257415 isoform 1 TOP1 0.078 DNA topoisomerase I DSPP 0.077 dentin sialophosphoprotein preproprotein LOC100131202 0.075 PREDICTED: hypothetical protein LMOD1 0.075 leiomodin 1 (smooth muscle) ANKRD11 0.074 ankyrin repeat domain 11 LOC100131202 0.072 PREDICTED: hypothetical protein TAF3 0.071 RNA polymerase II transcription factor TAFII140 [Ho... MAP1A 0.071 microtubule-associated protein 1A RTF1 0.071 Paf1/RNA polymerase II complex component PSIP1 0.071 PC4 and SFRS1 interacting protein 1 isoform 2 [Homo... PSIP1 0.071 PC4 and SFRS1 interacting protein 1 isoform 2 LOC100286959 0.071 PREDICTED: hypothetical protein XP_002343921 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.