Guide to the Human Genome
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Name: EPHB2 Sequence: fasta or formatted (986aa) NCBI GI: 111118978
Description:

ephrin receptor EphB2 isoform 1 precursor

Referenced in:

Ephrins and Ephrin Receptors

Other entries for this name:
alt prot [987aa] ephrin receptor EphB2 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         71           2
 C cysteine            2.6         26           1
 D aspartate           5.2         51           2
 E glutamate           6.0         59           2
 F phenylalanine       3.9         38           1
 G glycine             6.9         68           2
 H histidine           1.5         15           1
 I isoleucine          6.4         63           2
 K lysine              3.9         38           2
 L leucine             6.9         68           4
 M methionine          3.5         35           3
 N asparagine          4.7         46           2
 P proline             4.8         47           3
 Q glutamine           4.5         44           1
 R arginine            5.4         53           3
 S serine              7.7         76           2
 T threonine           6.4         63           2
 V valine              7.3         72           3
 W tryptophan          1.4         14           1
 Y tyrosine            4.0         39           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ephrin receptor EphB2 isoform 1 precursor 
EPHB2                 0.997   ephrin receptor EphB2 isoform 2 precursor 
EPHB1                 0.753   ephrin receptor EphB1 precursor 
EPHB3                 0.701   ephrin receptor EphB3 precursor 
EPHA5                 0.581   ephrin receptor EphA5 isoform b precursor 
EPHA4                 0.578   ephrin receptor EphA4 
EPHA5                 0.576   ephrin receptor EphA5 isoform a precursor 
EPHA7                 0.575   ephrin receptor EphA7 
EPHA3                 0.557   ephrin receptor EphA3 isoform a precursor 
EPHB4                 0.539   EPH receptor B4 precursor 
EPHA6                 0.532   EPH receptor A6 isoform a 
EPHA8                 0.510   ephrin receptor EphA8 isoform 1 precursor 
EPHB6                 0.460   ephrin receptor EphB6 precursor 
EPHA2                 0.445   ephrin receptor EphA2 
EPHA10                0.397   EPH receptor A10 isofom 3 
EPHA1                 0.352   ephrin receptor EphA1 
EPHA3                 0.275   ephrin receptor EphA3 isoform b precursor 
EPHA8                 0.210   ephrin receptor EphA8 isoform 2 precursor 
EPHA10                0.122   EPH receptor A10 isoform 2 
HCK                   0.103   hemopoietic cell kinase isoform p61HCK 
YES1                  0.102   viral oncogene yes-1 homolog 1 
PTK2                  0.100   PTK2 protein tyrosine kinase 2 isoform b 
PTK2                  0.100   PTK2 protein tyrosine kinase 2 isoform a 
LYN                   0.100   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog ...
LYN                   0.100   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is...
FYN                   0.099   protein-tyrosine kinase fyn isoform a 
LCK                   0.099   lymphocyte-specific protein tyrosine kinase precurs...
LCK                   0.099   lymphocyte-specific protein tyrosine kinase precurs...
SRC                   0.099   proto-oncogene tyrosine-protein kinase SRC 
SRC                   0.099   proto-oncogene tyrosine-protein kinase SRC 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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