Guide to the Human Genome
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Name: EPHA5 Sequence: fasta or formatted (1015aa) NCBI GI: 221625422
Description:

ephrin receptor EphA5 isoform b precursor

Referenced in:

Ephrins and Ephrin Receptors

Other entries for this name:
alt prot [1037aa] ephrin receptor EphA5 isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         68           2
 C cysteine            3.0         30           1
 D aspartate           4.4         45           2
 E glutamate           7.1         72           3
 F phenylalanine       3.2         32           2
 G glycine             7.6         77           3
 H histidine           2.0         20           1
 I isoleucine          5.6         57           2
 K lysine              5.7         58           2
 L leucine             7.5         76           3
 M methionine          2.8         28           2
 N asparagine          4.4         45           2
 P proline             5.5         56           2
 Q glutamine           3.0         30           1
 R arginine            5.4         55           3
 S serine              7.7         78           2
 T threonine           5.5         56           2
 V valine              7.9         80           2
 W tryptophan          1.4         14           1
 Y tyrosine            3.7         38           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ephrin receptor EphA5 isoform b precursor 
EPHA5                 0.993   ephrin receptor EphA5 isoform a precursor 
EPHA3                 0.677   ephrin receptor EphA3 isoform a precursor 
EPHA7                 0.636   ephrin receptor EphA7 
EPHA4                 0.632   ephrin receptor EphA4 
EPHA6                 0.600   EPH receptor A6 isoform a 
EPHA8                 0.585   ephrin receptor EphA8 isoform 1 precursor 
EPHB2                 0.563   ephrin receptor EphB2 isoform 2 precursor 
EPHB2                 0.562   ephrin receptor EphB2 isoform 1 precursor 
EPHB1                 0.544   ephrin receptor EphB1 precursor 
EPHB3                 0.524   ephrin receptor EphB3 precursor 
EPHA2                 0.490   ephrin receptor EphA2 
EPHA10                0.444   EPH receptor A10 isofom 3 
EPHB4                 0.440   EPH receptor B4 precursor 
EPHA1                 0.378   ephrin receptor EphA1 
EPHB6                 0.359   ephrin receptor EphB6 precursor 
EPHA3                 0.348   ephrin receptor EphA3 isoform b precursor 
EPHA8                 0.259   ephrin receptor EphA8 isoform 2 precursor 
EPHA10                0.143   EPH receptor A10 isoform 2 
INSR                  0.103   insulin receptor isoform Short precursor 
INSR                  0.103   insulin receptor isoform Long precursor 
HCK                   0.100   hemopoietic cell kinase isoform p61HCK 
LYN                   0.098   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog ...
LYN                   0.098   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is...
FRK                   0.097   fyn-related kinase 
YES1                  0.097   viral oncogene yes-1 homolog 1 
PTK2                  0.096   PTK2 protein tyrosine kinase 2 isoform b 
PTK2                  0.096   PTK2 protein tyrosine kinase 2 isoform a 
FYN                   0.096   protein-tyrosine kinase fyn isoform a 
LCK                   0.096   lymphocyte-specific protein tyrosine kinase precurs...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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