Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: EPHA2 Sequence: fasta or formatted (976aa) NCBI GI: 32967311
Description:

ephrin receptor EphA2

Referenced in:

Ephrins and Ephrin Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         74           6
 C cysteine            2.7         26           1
 D aspartate           4.6         45           2
 E glutamate           7.2         70           2
 F phenylalanine       3.9         38           2
 G glycine             7.8         76           2
 H histidine           1.9         19           2
 I isoleucine          4.4         43           2
 K lysine              4.9         48           2
 L leucine             7.7         75           3
 M methionine          2.8         27           2
 N asparagine          2.9         28           1
 P proline             5.9         58           3
 Q glutamine           3.9         38           2
 R arginine            5.4         53           3
 S serine              7.3         71           2
 T threonine           5.9         58           2
 V valine              7.9         77           2
 W tryptophan          1.6         16           1
 Y tyrosine            3.7         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ephrin receptor EphA2 
EPHA5                 0.508   ephrin receptor EphA5 isoform b precursor 
EPHA5                 0.502   ephrin receptor EphA5 isoform a precursor 
EPHA7                 0.491   ephrin receptor EphA7 
EPHA3                 0.480   ephrin receptor EphA3 isoform a precursor 
EPHA4                 0.480   ephrin receptor EphA4 
EPHA6                 0.464   EPH receptor A6 isoform a 
EPHA1                 0.452   ephrin receptor EphA1 
EPHA8                 0.450   ephrin receptor EphA8 isoform 1 precursor 
EPHB2                 0.449   ephrin receptor EphB2 isoform 2 precursor 
EPHB2                 0.446   ephrin receptor EphB2 isoform 1 precursor 
EPHB1                 0.436   ephrin receptor EphB1 precursor 
EPHB3                 0.431   ephrin receptor EphB3 precursor 
EPHB4                 0.400   EPH receptor B4 precursor 
EPHA10                0.373   EPH receptor A10 isofom 3 
EPHB6                 0.328   ephrin receptor EphB6 precursor 
EPHA3                 0.225   ephrin receptor EphA3 isoform b precursor 
EPHA8                 0.197   ephrin receptor EphA8 isoform 2 precursor 
EPHA10                0.126   EPH receptor A10 isoform 2 
INSRR                 0.111   insulin receptor-related receptor precursor 
HCK                   0.103   hemopoietic cell kinase isoform p61HCK 
ERBB4                 0.102   v-erb-a erythroblastic leukemia viral oncogene homo...
ERBB4                 0.102   v-erb-a erythroblastic leukemia viral oncogene homolo...
IGF1R                 0.102   insulin-like growth factor 1 receptor precursor [Homo...
LYN                   0.101   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog ...
LYN                   0.101   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is...
INSR                  0.099   insulin receptor isoform Long precursor 
SRC                   0.099   proto-oncogene tyrosine-protein kinase SRC 
SRC                   0.099   proto-oncogene tyrosine-protein kinase SRC 
INSR                  0.098   insulin receptor isoform Short precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press