Guide to the Human Genome
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Name: EPHA10 Sequence: fasta or formatted (1008aa) NCBI GI: 150456460
Description:

EPH receptor A10 isofom 3

Referenced in:

Ephrins and Ephrin Receptors

Other entries for this name:
alt prot [295aa] EPH receptor A10 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         95           4
 C cysteine            3.4         34           2
 D aspartate           4.3         43           1
 E glutamate           6.3         64           3
 F phenylalanine       3.5         35           1
 G glycine             9.1         92           3
 H histidine           2.1         21           1
 I isoleucine          2.7         27           2
 K lysine              2.1         21           1
 L leucine            10.3        104           3
 M methionine          1.9         19           1
 N asparagine          1.3         13           1
 P proline             7.1         72           3
 Q glutamine           4.1         41           1
 R arginine            8.0         81           2
 S serine              8.3         84           2
 T threonine           5.2         52           2
 V valine              6.7         68           2
 W tryptophan          1.7         17           1
 Y tyrosine            2.5         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EPH receptor A10 isofom 3 
EPHA7                 0.517   ephrin receptor EphA7 
EPHA5                 0.446   ephrin receptor EphA5 isoform b precursor 
EPHA5                 0.443   ephrin receptor EphA5 isoform a precursor 
EPHA3                 0.441   ephrin receptor EphA3 isoform a precursor 
EPHA4                 0.428   ephrin receptor EphA4 
EPHA6                 0.415   EPH receptor A6 isoform a 
EPHA8                 0.415   ephrin receptor EphA8 isoform 1 precursor 
EPHB1                 0.391   ephrin receptor EphB1 precursor 
EPHB2                 0.387   ephrin receptor EphB2 isoform 2 precursor 
EPHB2                 0.386   ephrin receptor EphB2 isoform 1 precursor 
EPHB3                 0.382   ephrin receptor EphB3 precursor 
EPHA2                 0.361   ephrin receptor EphA2 
EPHB4                 0.347   EPH receptor B4 precursor 
EPHA1                 0.332   ephrin receptor EphA1 
EPHB6                 0.317   ephrin receptor EphB6 precursor 
EPHA10                0.278   EPH receptor A10 isoform 2 
EPHA3                 0.244   ephrin receptor EphA3 isoform b precursor 
EPHA8                 0.196   ephrin receptor EphA8 isoform 2 precursor 
PTK2                  0.087   PTK2 protein tyrosine kinase 2 isoform b 
PTK2                  0.087   PTK2 protein tyrosine kinase 2 isoform a 
NTRK2                 0.080   neurotrophic tyrosine kinase, receptor, type 2 isofo...
NTRK2                 0.080   neurotrophic tyrosine kinase, receptor, type 2 isofo...
TIE1                  0.079   tyrosine kinase with immunoglobulin-like and EGF-like...
NTRK1                 0.078   neurotrophic tyrosine kinase, receptor, type 1 isofo...
NTRK1                 0.078   neurotrophic tyrosine kinase, receptor, type 1 isofor...
NTRK1                 0.078   neurotrophic tyrosine kinase, receptor, type 1 isofo...
HCK                   0.078   hemopoietic cell kinase isoform p61HCK 
FES                   0.077   feline sarcoma oncogene isoform 4 
FES                   0.077   feline sarcoma oncogene isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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