Guide to the Human Genome
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Name: EPHA1 Sequence: fasta or formatted (976aa) NCBI GI: 221316650
Description:

ephrin receptor EphA1

Referenced in:

Ephrins and Ephrin Receptors
Liver

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         64           2
 C cysteine            3.0         29           2
 D aspartate           5.0         49           2
 E glutamate           6.0         59           2
 F phenylalanine       3.1         30           1
 G glycine             9.1         89           2
 H histidine           2.7         26           1
 I isoleucine          3.3         32           2
 K lysine              2.6         25           2
 L leucine            11.0        107           3
 M methionine          2.6         25           1
 N asparagine          2.6         25           1
 P proline             7.3         71           3
 Q glutamine           5.0         49           3
 R arginine            7.4         72           2
 S serine              6.5         63           2
 T threonine           5.8         57           2
 V valine              6.1         60           2
 W tryptophan          1.7         17           2
 Y tyrosine            2.8         27           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ephrin receptor EphA1 
EPHA2                 0.446   ephrin receptor EphA2 
EPHA7                 0.392   ephrin receptor EphA7 
EPHA5                 0.387   ephrin receptor EphA5 isoform b precursor 
EPHA4                 0.386   ephrin receptor EphA4 
EPHA5                 0.383   ephrin receptor EphA5 isoform a precursor 
EPHA3                 0.374   ephrin receptor EphA3 isoform a precursor 
EPHB3                 0.361   ephrin receptor EphB3 precursor 
EPHA6                 0.360   EPH receptor A6 isoform a 
EPHB1                 0.357   ephrin receptor EphB1 precursor 
EPHA8                 0.351   ephrin receptor EphA8 isoform 1 precursor 
EPHB2                 0.350   ephrin receptor EphB2 isoform 2 precursor 
EPHB2                 0.349   ephrin receptor EphB2 isoform 1 precursor 
EPHB4                 0.342   EPH receptor B4 precursor 
EPHA10                0.339   EPH receptor A10 isofom 3 
EPHB6                 0.305   ephrin receptor EphB6 precursor 
EPHA3                 0.179   ephrin receptor EphA3 isoform b precursor 
EPHA8                 0.151   ephrin receptor EphA8 isoform 2 precursor 
PTK2                  0.104   PTK2 protein tyrosine kinase 2 isoform b 
PTK2                  0.104   PTK2 protein tyrosine kinase 2 isoform a 
EPHA10                0.102   EPH receptor A10 isoform 2 
FER                   0.098   fer (fps/fes related) tyrosine kinase 
TYRO3                 0.096   TYRO3 protein tyrosine kinase 
FES                   0.095   feline sarcoma oncogene isoform 4 
FES                   0.095   feline sarcoma oncogene isoform 3 
FES                   0.095   feline sarcoma oncogene isoform 2 
FES                   0.095   feline sarcoma oncogene isoform 1 
MERTK                 0.095   MER receptor tyrosine kinase precursor 
FYN                   0.094   protein-tyrosine kinase fyn isoform a 
YES1                  0.094   viral oncogene yes-1 homolog 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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