Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: EPHA10 Sequence: fasta or formatted (295aa) NCBI GI: 150456469
Description:

EPH receptor A10 isoform 2

Referenced in:

Ephrins and Ephrin Receptors

Other entries for this name:
alt prot [1008aa] EPH receptor A10 isofom 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         25           2
 C cysteine            4.4         13           1
 D aspartate           4.1         12           1
 E glutamate           7.8         23           2
 F phenylalanine       3.7         11           1
 G glycine            11.5         34           2
 H histidine           1.7          5           1
 I isoleucine          3.4         10           1
 K lysine              2.0          6           1
 L leucine             9.5         28           3
 M methionine          1.4          4           1
 N asparagine          2.0          6           1
 P proline             5.4         16           2
 Q glutamine           4.1         12           1
 R arginine            8.5         25           2
 S serine              5.8         17           2
 T threonine           5.8         17           1
 V valine              6.8         20           1
 W tryptophan          2.0          6           1
 Y tyrosine            1.7          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   EPH receptor A10 isoform 2 
EPHA10                0.961   EPH receptor A10 isofom 3 
EPHA7                 0.574   ephrin receptor EphA7 
EPHA3                 0.508   ephrin receptor EphA3 isoform b precursor 
EPHA3                 0.508   ephrin receptor EphA3 isoform a precursor 
EPHA4                 0.501   ephrin receptor EphA4 
EPHA5                 0.497   ephrin receptor EphA5 isoform b precursor 
EPHA5                 0.497   ephrin receptor EphA5 isoform a precursor 
EPHA6                 0.480   EPH receptor A6 isoform a 
EPHA8                 0.477   ephrin receptor EphA8 isoform 2 precursor 
EPHA8                 0.477   ephrin receptor EphA8 isoform 1 precursor 
EPHB1                 0.430   ephrin receptor EphB1 precursor 
EPHA2                 0.421   ephrin receptor EphA2 
EPHB2                 0.411   ephrin receptor EphB2 isoform 1 precursor 
EPHB2                 0.411   ephrin receptor EphB2 isoform 2 precursor 
EPHB3                 0.390   ephrin receptor EphB3 precursor 
EPHA1                 0.345   ephrin receptor EphA1 
EPHB6                 0.312   ephrin receptor EphB6 precursor 
EPHB4                 0.290   EPH receptor B4 precursor 
PIM2                  0.012   serine/threonine protein kinase pim-2 
ADAMTS12              0.008   ADAM metallopeptidase with thrombospondin type 1 mot...
DDX5                  0.005   DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 
LOC100293203          0.005   PREDICTED: hypothetical protein 
LOC100289270          0.005   PREDICTED: hypothetical protein 
LOC100289270          0.005   PREDICTED: hypothetical protein XP_002342398 
SPTBN4                0.005   spectrin, beta, non-erythrocytic 4 isoform sigma1 [...
SELE                  0.005   selectin E precursor 
LOC729912             0.005   PREDICTED: hypothetical protein 
LOC729907             0.005   PREDICTED: hypothetical protein 
LOC100133178          0.005   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press