Guide to the Human Genome
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Name: YES1 Sequence: fasta or formatted (543aa) NCBI GI: 4885661
Description:

viral oncogene yes-1 homolog 1

Referenced in:

Gap Junctions and Tight Junctions
Retroviral Oncogene Homologs
Non-Receptor Tyrosine Kinase Pathways
WW Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         37           2
 C cysteine            1.7          9           1
 D aspartate           4.4         24           1
 E glutamate           7.7         42           2
 F phenylalanine       3.9         21           1
 G glycine             8.3         45           2
 H histidine           1.5          8           1
 I isoleucine          5.2         28           2
 K lysine              6.8         37           2
 L leucine             7.9         43           3
 M methionine          2.6         14           2
 N asparagine          3.5         19           2
 P proline             6.1         33           1
 Q glutamine           3.5         19           1
 R arginine            4.8         26           1
 S serine              6.4         35           3
 T threonine           6.8         37           2
 V valine              5.7         31           2
 W tryptophan          1.8         10           2
 Y tyrosine            4.6         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   viral oncogene yes-1 homolog 1 
SRC                   0.728   proto-oncogene tyrosine-protein kinase SRC 
SRC                   0.728   proto-oncogene tyrosine-protein kinase SRC 
FYN                   0.722   protein-tyrosine kinase fyn isoform b 
FYN                   0.704   protein-tyrosine kinase fyn isoform a 
FGR                   0.666   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.666   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.666   proto-oncogene tyrosine-protein kinase FGR 
FYN                   0.634   protein-tyrosine kinase fyn isoform c 
HCK                   0.543   hemopoietic cell kinase isoform p61HCK 
LYN                   0.515   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog ...
LYN                   0.515   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is...
LCK                   0.511   lymphocyte-specific protein tyrosine kinase precurs...
LCK                   0.511   lymphocyte-specific protein tyrosine kinase precurs...
BLK                   0.488   B lymphoid tyrosine kinase 
FRK                   0.402   fyn-related kinase 
PTK6                  0.324   PTK6 protein tyrosine kinase 6 
ABL1                  0.315   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.315   c-abl oncogene 1, receptor tyrosine kinase isoform b...
ABL2                  0.314   arg tyrosine kinase isoform c 
ABL2                  0.314   arg tyrosine kinase isoform b 
ABL2                  0.314   arg tyrosine kinase isoform d 
ABL2                  0.314   arg tyrosine kinase isoform a 
ABL2                  0.313   arg tyrosine kinase isoform e 
SRMS                  0.296   src-related kinase lacking C-terminal regulatory tyr...
TEC                   0.270   tec protein tyrosine kinase 
BTK                   0.269   Bruton agammaglobulinemia tyrosine kinase 
TXK                   0.268   TXK tyrosine kinase 
ITK                   0.265   IL2-inducible T-cell kinase 
CSK                   0.246   c-src tyrosine kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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