Guide to the Human Genome
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Name: MYO15A Sequence: fasta or formatted (3530aa) NCBI GI: 118402590
Description:

myosin XV

Referenced in:

Myosin
PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6        305           4
 C cysteine            1.3         45           2
 D aspartate           4.1        144           2
 E glutamate           6.1        216           3
 F phenylalanine       4.1        146           3
 G glycine             6.5        230           3
 H histidine           2.7         94           2
 I isoleucine          2.9        104           3
 K lysine              4.7        166           3
 L leucine            10.6        375           3
 M methionine          1.8         65           1
 N asparagine          2.2         76           2
 P proline            10.1        357           3
 Q glutamine           5.2        185           3
 R arginine            7.6        270           3
 S serine              6.9        244           3
 T threonine           4.1        143           2
 V valine              5.5        195           2
 W tryptophan          1.2         43           2
 Y tyrosine            3.6        127           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin XV 
MYO7B                 0.082   myosin VIIB 
MYO10                 0.079   myosin X 
MYO7A                 0.076   myosin VIIA isoform 2 
MYO7A                 0.076   myosin VIIA isoform 3 
MYO7A                 0.076   myosin VIIA isoform 1 
MYO5B                 0.068   myosin VB 
MYO5A                 0.068   myosin VA isoform 2 
MYO5A                 0.068   myosin VA isoform 1 
MYO1B                 0.066   myosin IB isoform 1 
MYO1B                 0.066   myosin IB isoform 2 
MYO1B                 0.066   myosin IB isoform 1 
MYO5C                 0.066   myosin VC 
MYO1A                 0.065   myosin IA 
MYO3B                 0.064   myosin IIIB isoform 2 
MYH9                  0.063   myosin, heavy polypeptide 9, non-muscle 
MYO3A                 0.063   myosin IIIA 
MYH10                 0.062   myosin, heavy polypeptide 10, non-muscle 
MYH11                 0.062   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.062   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYO3B                 0.062   myosin IIIB isoform 1 
MYH11                 0.062   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.062   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYO1C                 0.061   myosin IC isoform b 
MYO1C                 0.061   myosin IC isoform a 
MYO1C                 0.061   myosin IC isoform c 
MYO1F                 0.061   myosin IF 
MYH14                 0.061   myosin, heavy chain 14 isoform 2 
MYO1H                 0.061   myosin 1H 
MYO1D                 0.060   myosin ID 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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