| Name: C2orf55 | Sequence: fasta or formatted (962aa) | NCBI GI: 116256464 | |
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Description: hypothetical protein LOC343990
| Not currently referenced in the text | ||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 11.2 108 4 C cysteine 1.0 10 1 D aspartate 4.6 44 2 E glutamate 9.8 94 4 F phenylalanine 1.5 14 2 G glycine 7.7 74 2 H histidine 1.0 10 1 I isoleucine 1.8 17 2 K lysine 6.8 65 3 L leucine 6.3 61 2 M methionine 1.0 10 2 N asparagine 1.2 12 1 P proline 15.0 144 5 Q glutamine 3.8 37 2 R arginine 7.9 76 2 S serine 9.8 94 3 T threonine 4.3 41 2 V valine 4.3 41 2 W tryptophan 0.5 5 1 Y tyrosine 0.5 5 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC343990 NACA 0.057 nascent polypeptide-associated complex alpha subuni... PRG4 0.049 proteoglycan 4 isoform B PRG4 0.049 proteoglycan 4 isoform A PRG4 0.049 proteoglycan 4 isoform D PRG4 0.049 proteoglycan 4 isoform C SETD1B 0.039 SET domain containing 1B KIAA1211 0.038 hypothetical protein LOC57482 BAT2 0.037 HLA-B associated transcript-2 FLJ22184 0.037 PREDICTED: hypothetical protein FLJ22184 TTN 0.036 titin isoform N2-A SRRM1 0.035 serine/arginine repetitive matrix 1 PCLO 0.034 piccolo isoform 2 PCLO 0.034 piccolo isoform 1 FLJ22184 0.034 PREDICTED: hypothetical protein FLJ22184 NEFH 0.033 neurofilament, heavy polypeptide 200kDa KDM6B 0.033 lysine (K)-specific demethylase 6B COL1A1 0.032 alpha 1 type I collagen preproprotein PRB2 0.032 proline-rich protein BstNI subfamily 2 TAF4 0.031 TBP-associated factor 4 RAPH1 0.031 Ras association and pleckstrin homology domains 1 is... C6orf132 0.031 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.031 PREDICTED: chromosome 6 open reading frame 132 [Hom... FLJ22184 0.031 PREDICTED: hypothetical protein LOC80164 C6orf132 0.031 PREDICTED: hypothetical protein LOC647024 PRB1 0.031 proline-rich protein BstNI subfamily 1 isoform 1 pre... SRRM2 0.030 splicing coactivator subunit SRm300 ZNF828 0.030 zinc finger protein 828 KIAA0754 0.029 hypothetical protein LOC643314 WIPF3 0.029 WAS/WASL interacting protein family, member 3 [Homo...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
