Guide to the Human Genome
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Name: MTRF1L Sequence: fasta or formatted (380aa) NCBI GI: 166795303
Description:

mitochondrial translational release factor 1-like isoform a

Referenced in:

Translation Factors

Other entries for this name:
alt prot [271aa] mitochondrial translational release factor 1-like isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         23           2
 C cysteine            0.5          2           1
 D aspartate           3.4         13           1
 E glutamate          10.5         40           3
 F phenylalanine       2.6         10           1
 G glycine             6.1         23           2
 H histidine           3.7         14           1
 I isoleucine          5.3         20           2
 K lysine              6.1         23           1
 L leucine            11.6         44           3
 M methionine          2.1          8           1
 N asparagine          3.4         13           1
 P proline             3.9         15           2
 Q glutamine           5.3         20           2
 R arginine            8.4         32           2
 S serine              5.8         22           2
 T threonine           6.1         23           2
 V valine              5.8         22           2
 W tryptophan          1.1          4           1
 Y tyrosine            2.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial translational release factor 1-like i... 
MTRF1L                0.703   mitochondrial translational release factor 1-like i...
MTRF1                 0.408   mitochondrial translational release factor 1 
C12orf65              0.030   hypothetical protein LOC91574 
C12orf65              0.030   hypothetical protein LOC91574 
LOC647042             0.021   PREDICTED: hypothetical protein isoform 2 
LOC100133220          0.018   PREDICTED: hypothetical protein 
LOC647042             0.015   PREDICTED: hypothetical protein isoform 1 
LOC728636             0.014   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC440295             0.014   hypothetical protein LOC440295 
CGNL1                 0.014   cingulin-like 1 
OPA1                  0.012   optic atrophy 1 isoform 7 
CCDC39                0.011   coiled-coil domain containing 39 
LOC653061             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.011   PREDICTED: similar to Golgin subfamily A member 8-l...
CENPF                 0.011   centromere protein F 
RB1CC1                0.011   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.011   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
SYNE2                 0.011   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.011   spectrin repeat containing, nuclear envelope 2 isof...
LOC100292334          0.010   PREDICTED: similar to GOLGA8B protein, partial [Hom...
ZNF398                0.010   zinc finger 398 isoform a 
CCDC30                0.010   coiled-coil domain containing 30 
ANGPTL3               0.010   angiopoietin-like 3 precursor 
CLUL1                 0.010   clusterin-like 1 (retinal) 
CLUL1                 0.010   clusterin-like 1 (retinal) 
GOLGA8B               0.010   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8A               0.010   golgi autoantigen, golgin subfamily a, 8A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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