CCDC39 6404

Name: CCDC39	Sequence: fasta or formatted (941aa)		NCBI GI: 157785668
Description: coiled-coil domain containing 39		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 49 2 C cysteine 1.0 9 1 D aspartate 4.9 46 2 E glutamate 14.0 132 3 F phenylalanine 2.1 20 1 G glycine 1.8 17 1 H histidine 1.9 18 1 I isoleucine 6.1 57 2 K lysine 12.2 115 2 L leucine 11.1 104 2 M methionine 2.1 20 1 N asparagine 4.5 42 3 P proline 1.1 10 2 Q glutamine 7.0 66 2 R arginine 5.5 52 2 S serine 8.4 79 5 T threonine 5.5 52 1 V valine 3.4 32 2 W tryptophan 0.4 4 1 Y tyrosine 1.8 17 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 39 MYH11 0.066 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.066 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.066 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.066 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CENPE 0.065 centromere protein E EEA1 0.062 early endosome antigen 1, 162kD CENPF 0.062 centromere protein F MYH10 0.062 myosin, heavy polypeptide 10, non-muscle GCC2 0.058 GRIP and coiled-coil domain-containing 2 CLIP1 0.058 restin isoform b CLIP1 0.058 restin isoform a MYH13 0.058 myosin, heavy polypeptide 13, skeletal muscle [Homo... UACA 0.056 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.056 uveal autoantigen with coiled-coil domains and ankyr... MYH9 0.056 myosin, heavy polypeptide 9, non-muscle MYH2 0.056 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.056 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH3 0.056 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYH4 0.054 myosin, heavy polypeptide 4, skeletal muscle MYH6 0.053 myosin heavy chain 6 CEP110 0.053 centrosomal protein 110kDa LOC727832 0.053 golgi autoantigen, golgin subfamily a-like MYH1 0.053 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH8 0.052 myosin, heavy chain 8, skeletal muscle, perinatal [... GOLGB1 0.052 golgi autoantigen, golgin subfamily b, macrogolgin ... NUMA1 0.051 nuclear mitotic apparatus protein 1 KTN1 0.051 kinectin 1 isoform a KTN1 0.051 kinectin 1 isoform a DSP 0.050 desmoplakin isoform I Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.