CCDC30 2734

Name: CCDC30	Sequence: fasta or formatted (783aa)		NCBI GI: 124249396
Description: coiled-coil domain containing 30		Referenced in: Coiled-Coil Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.4 27 1 C cysteine 1.4 11 1 D aspartate 3.2 25 2 E glutamate 15.2 119 2 F phenylalanine 1.4 11 1 G glycine 2.7 21 2 H histidine 3.2 25 2 I isoleucine 5.1 40 2 K lysine 10.9 85 2 L leucine 11.7 92 3 M methionine 1.1 9 1 N asparagine 5.2 41 2 P proline 2.2 17 2 Q glutamine 10.3 81 3 R arginine 4.1 32 2 S serine 8.9 70 2 T threonine 3.8 30 2 V valine 3.7 29 2 W tryptophan 0.6 5 2 Y tyrosine 1.7 13 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 30 CLIP1 0.055 restin isoform b CLIP1 0.055 restin isoform a LOC283767 0.054 golgi autoantigen, golgin subfamily a-like LOC727832 0.054 golgi autoantigen, golgin subfamily a-like LOC283685 0.051 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC440243 0.051 PREDICTED: Putative golgin subfamily A member 6-lik... MYH9 0.051 myosin, heavy polypeptide 9, non-muscle CCDC18 0.050 sarcoma antigen NY-SAR-41 RAD50 0.050 RAD50 homolog isoform 2 RAD50 0.050 RAD50 homolog isoform 1 EEA1 0.050 early endosome antigen 1, 162kD LOC283685 0.049 PREDICTED: golgi autoantigen, golgin subfamily a-li... TRIP11 0.049 thyroid hormone receptor interactor 11 CENPF 0.049 centromere protein F GOLGB1 0.047 golgi autoantigen, golgin subfamily b, macrogolgin ... MYH1 0.047 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH8 0.047 myosin, heavy chain 8, skeletal muscle, perinatal [... MYH4 0.047 myosin, heavy polypeptide 4, skeletal muscle CCDC88A 0.046 coiled-coil domain containing 88A isoform 1 MYH2 0.046 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.046 myosin, heavy chain 2, skeletal muscle, adult [Homo... TCHH 0.046 trichohyalin MYH13 0.046 myosin, heavy polypeptide 13, skeletal muscle [Homo... MYH3 0.046 myosin, heavy chain 3, skeletal muscle, embryonic [H... MYH10 0.046 myosin, heavy polypeptide 10, non-muscle CEP250 0.046 centrosomal protein 2 GOLGA4 0.045 golgi autoantigen, golgin subfamily a, 4 LOC645202 0.044 PREDICTED: hypothetical protein LOC645202 CEP110 0.044 centrosomal protein 110kDa Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.