Guide to the Human Genome
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Name: GOLGA8B Sequence: fasta or formatted (603aa) NCBI GI: 195947367
Description:

golgi autoantigen, golgin subfamily a, 8B

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         59           3
 C cysteine            2.0         12           2
 D aspartate           3.0         18           1
 E glutamate          13.1         79           3
 F phenylalanine       1.0          6           1
 G glycine             7.0         42           3
 H histidine           3.0         18           2
 I isoleucine          1.7         10           1
 K lysine              8.1         49           3
 L leucine            10.4         63           2
 M methionine          1.3          8           1
 N asparagine          3.0         18           2
 P proline             4.3         26           2
 Q glutamine           9.1         55           2
 R arginine            7.1         43           4
 S serine              8.1         49           3
 T threonine           2.7         16           1
 V valine              3.5         21           1
 W tryptophan          0.8          5           1
 Y tyrosine            1.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8A               0.998   golgi autoantigen, golgin subfamily a, 8A 
LOC653061             0.707   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.700   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.686   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.685   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.685   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.683   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.680   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653061             0.679   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.676   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.671   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.670   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653720             0.644   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.637   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.637   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.637   PREDICTED: Golgin subfamily A member 8-like protein...
LOC727909             0.635   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.633   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.626   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.621   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.579   PREDICTED: Golgin subfamily A member 8-like protein...
LOC390561             0.549   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.538   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.532   PREDICTED: similar to hect domain and RLD 2 
LOC653061             0.513   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC100292334          0.508   PREDICTED: similar to GOLGA8B protein, partial [Hom...
GOLGA8G               0.488   golgi autoantigen, golgin subfamily a, 8G 
GOLGA8E               0.487   golgi autoantigen, golgin subfamily a, 8E 
GOLGA6                0.397   golgi autoantigen, golgin subfamily a, 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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