Guide to the Human Genome
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Name: MTRF1L Sequence: fasta or formatted (271aa) NCBI GI: 166795305
Description:

mitochondrial translational release factor 1-like isoform b

Referenced in:

Translation Factors

Other entries for this name:
alt prot [380aa] mitochondrial translational release factor 1-like isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         19           2
 C cysteine            0.4          1           1
 D aspartate           3.3          9           1
 E glutamate          10.3         28           2
 F phenylalanine       3.0          8           1
 G glycine             7.0         19           2
 H histidine           4.1         11           1
 I isoleucine          4.8         13           2
 K lysine              4.8         13           1
 L leucine            11.8         32           3
 M methionine          1.8          5           1
 N asparagine          2.6          7           1
 P proline             5.2         14           2
 Q glutamine           4.1         11           2
 R arginine            8.9         24           2
 S serine              5.2         14           2
 T threonine           6.6         18           2
 V valine              5.9         16           1
 W tryptophan          1.8          5           1
 Y tyrosine            1.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitochondrial translational release factor 1-like i... 
MTRF1L                0.985   mitochondrial translational release factor 1-like i...
MTRF1                 0.355   mitochondrial translational release factor 1 
LOC647042             0.029   PREDICTED: hypothetical protein isoform 2 
LOC100133220          0.025   PREDICTED: hypothetical protein 
LOC647042             0.021   PREDICTED: hypothetical protein isoform 1 
LOC728636             0.019   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC440295             0.019   hypothetical protein LOC440295 
OPA1                  0.017   optic atrophy 1 isoform 7 
CCDC39                0.015   coiled-coil domain containing 39 
LOC653061             0.015   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.015   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.015   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.015   PREDICTED: similar to Golgin subfamily A member 8-l...
CGNL1                 0.015   cingulin-like 1 
CENPF                 0.015   centromere protein F 
RB1CC1                0.015   Rb1-inducible coiled coil protein 1 isoform 2 [Homo...
RB1CC1                0.015   Rb1-inducible coiled coil protein 1 isoform 1 [Homo...
SYNE2                 0.015   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.015   spectrin repeat containing, nuclear envelope 2 isof...
LOC100292334          0.013   PREDICTED: similar to GOLGA8B protein, partial [Hom...
ZNF398                0.013   zinc finger 398 isoform a 
CCDC30                0.013   coiled-coil domain containing 30 
ANGPTL3               0.013   angiopoietin-like 3 precursor 
CLUL1                 0.013   clusterin-like 1 (retinal) 
CLUL1                 0.013   clusterin-like 1 (retinal) 
GOLGA8B               0.013   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8A               0.013   golgi autoantigen, golgin subfamily a, 8A 
WNK4                  0.013   WNK lysine deficient protein kinase 4 
PMFBP1                0.013   polyamine modulated factor 1 binding protein 1 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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