Guide to the Human Genome
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Name: LOC653061 Sequence: fasta or formatted (547aa) NCBI GI: 239745087
Description:

PREDICTED: similar to Golgin subfamily A member 8-like protein 1 isoform 1

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [629aa] PREDICTED: similar to Golgin subfamily A member 8-like protein 1 ...
alt prot [590aa] PREDICTED: similar to Golgin subfamily A member 8-like protein 1 ...
alt prot [601aa] PREDICTED: similar to Golgin subfamily A member 8-like protein 1 ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         55           3
 C cysteine            1.3          7           2
 D aspartate           2.9         16           1
 E glutamate          11.7         64           3
 F phenylalanine       1.1          6           2
 G glycine             4.9         27           2
 H histidine           2.7         15           1
 I isoleucine          1.5          8           1
 K lysine              9.1         50           3
 L leucine            11.0         60           2
 M methionine          1.3          7           1
 N asparagine          3.8         21           2
 P proline             5.5         30           2
 Q glutamine           9.5         52           2
 R arginine            7.1         39           4
 S serine              6.8         37           2
 T threonine           3.3         18           1
 V valine              3.8         21           2
 W tryptophan          1.1          6           1
 Y tyrosine            1.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Golgin subfamily A member 8-l... 
LOC653061             0.876   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.831   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.729   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.717   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.716   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653125             0.714   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.714   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.688   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.688   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.688   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.680   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.636   PREDICTED: Golgin subfamily A member 8-like protein...
LOC643699             0.622   PREDICTED: similar to golgi autoantigen, golgin sub...
GOLGA8A               0.619   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.618   golgi autoantigen, golgin subfamily a, 8B 
LOC728498             0.609   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.609   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653720             0.608   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.602   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.593   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.593   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.591   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC390561             0.570   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.499   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.499   PREDICTED: similar to hect domain and RLD 2 
GOLGA8E               0.357   golgi autoantigen, golgin subfamily a, 8E 
GOLGA6                0.355   golgi autoantigen, golgin subfamily a, 6 
GOLGA8G               0.351   golgi autoantigen, golgin subfamily a, 8G 
GOLGA6C               0.350   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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