Guide to the Human Genome
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Name: LOC100292334 Sequence: fasta or formatted (314aa) NCBI GI: 239756284
Description:

PREDICTED: similar to GOLGA8B protein, partial

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         32           3
 C cysteine            2.5          8           2
 D aspartate           3.8         12           1
 E glutamate          14.3         45           2
 F phenylalanine       1.0          3           1
 G glycine             9.6         30           3
 H histidine           3.2         10           2
 I isoleucine          0.6          2           1
 K lysine              4.5         14           1
 L leucine            10.8         34           2
 M methionine          0.6          2           1
 N asparagine          2.5          8           2
 P proline             6.1         19           1
 Q glutamine           8.9         28           2
 R arginine            6.7         21           4
 S serine              6.1         19           2
 T threonine           2.2          7           1
 V valine              5.1         16           2
 W tryptophan          0.6          2           1
 Y tyrosine            0.6          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to GOLGA8B protein, partial [Hom... 
GOLGA8A               0.979   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.977   golgi autoantigen, golgin subfamily a, 8B 
GOLGA8G               0.691   golgi autoantigen, golgin subfamily a, 8G 
GOLGA8E               0.690   golgi autoantigen, golgin subfamily a, 8E 
LOC653720             0.667   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.660   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.660   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.660   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.658   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.652   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728498             0.650   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.639   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.632   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.631   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.611   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.603   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.603   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.603   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.599   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.594   PREDICTED: Golgin subfamily A member 8-like protein...
LOC728498             0.594   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.589   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653125             0.570   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.550   PREDICTED: Golgin subfamily A member 8-like protein...
LOC390561             0.532   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.527   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.481   PREDICTED: similar to hect domain and RLD 2 
GOLGA8F               0.435   golgi autoantigen, golgin subfamily a, 8F 
LOC653061             0.379   PREDICTED: similar to Golgin subfamily A member 8-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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