SYNE2 2232

Name: SYNE2	Sequence: fasta or formatted (6885aa)		NCBI GI: 118918403
Description: spectrin repeat containing, nuclear envelope 2 isoform 1		Referenced in: Spectrin and Plectin Families
Other entries for this name: alt prot [6907aa] spectrin repeat containing, nuclear envelope 2 isoform 5 alt prot [429aa] spectrin repeat containing, nuclear envelope 2 isoform 2 alt prot [556aa] spectrin repeat containing, nuclear envelope 2 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 355 3 C cysteine 1.5 103 2 D aspartate 5.1 354 2 E glutamate 11.6 801 4 F phenylalanine 2.6 178 2 G glycine 2.8 191 2 H histidine 2.5 169 3 I isoleucine 5.2 357 3 K lysine 8.7 596 3 L leucine 13.0 893 9 M methionine 2.4 163 2 N asparagine 4.6 318 2 P proline 2.8 193 3 Q glutamine 7.7 531 5 R arginine 4.2 288 3 S serine 7.5 517 4 T threonine 4.8 331 3 V valine 4.8 329 2 W tryptophan 1.4 95 1 Y tyrosine 1.8 123 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 spectrin repeat containing, nuclear envelope 2 isof... SYNE2 0.999 spectrin repeat containing, nuclear envelope 2 isof... SYNE1 0.164 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.164 spectrin repeat containing, nuclear envelope 1 isof... SYNE1 0.143 spectrin repeat containing, nuclear envelope 1 isof... SYNE2 0.074 spectrin repeat containing, nuclear envelope 2 isofo... SYNE1 0.067 spectrin repeat containing, nuclear envelope 1 isof... SYNE2 0.058 spectrin repeat containing, nuclear envelope 2 isofo... DST 0.015 dystonin isoform 4 DST 0.015 dystonin isoform 3 DST 0.015 dystonin isoform 2 DST 0.015 dystonin isoform 1 DST 0.015 dystonin isoform 1eA precursor CLMN 0.015 calmin UTRN 0.015 utrophin MACF1 0.014 microfilament and actin filament cross-linker protei... PLEC1 0.013 plectin 1 isoform 3 PLEC1 0.013 plectin 1 isoform 8 PLEC1 0.013 plectin 1 isoform 2 PLEC1 0.013 plectin 1 isoform 1 MACF1 0.013 microfilament and actin filament cross-linker protei... PLEC1 0.013 plectin 1 isoform 11 PLEC1 0.013 plectin 1 isoform 10 PLEC1 0.013 plectin 1 isoform 7 PLEC1 0.013 plectin 1 isoform 6 LOC652460 0.013 PREDICTED: similar to plectin 1, partial SPTBN1 0.013 spectrin, beta, non-erythrocytic 1 isoform 2 SPTBN1 0.013 spectrin, beta, non-erythrocytic 1 isoform 1 SPTBN2 0.013 spectrin, beta, non-erythrocytic 2 SPTB 0.013 spectrin beta isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.