| Name: CXXC5 | Sequence: fasta or formatted (322aa) | NCBI GI: 158261990 | |
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Description: CXXC finger 5
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 15.5 50 6 C cysteine 2.5 8 1 D aspartate 2.8 9 2 E glutamate 5.6 18 2 F phenylalanine 2.8 9 1 G glycine 11.2 36 3 H histidine 1.9 6 1 I isoleucine 2.2 7 2 K lysine 6.5 21 3 L leucine 8.1 26 2 M methionine 3.7 12 2 N asparagine 2.8 9 1 P proline 5.6 18 3 Q glutamine 3.4 11 2 R arginine 5.0 16 3 S serine 13.0 42 5 T threonine 3.1 10 1 V valine 3.1 10 2 W tryptophan 0.3 1 1 Y tyrosine 0.9 3 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 CXXC finger 5 CXXC4 0.189 CXXC finger 4 TET1 0.102 CXXC finger 6 ZSWIM6 0.041 zinc finger, SWIM-type containing 6 SOX4 0.036 SRY (sex determining region Y)-box 4 CNOT3 0.034 CCR4-NOT transcription complex, subunit 3 TNRC18 0.031 trinucleotide repeat containing 18 ZNF703 0.031 zinc finger protein 703 SRRM2 0.031 splicing coactivator subunit SRm300 ARID1B 0.031 AT rich interactive domain 1B (SWI1-like) isoform 2 ... ARID1B 0.031 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.031 AT rich interactive domain 1B (SWI1-like) isoform 3 ... SPEG 0.030 SPEG complex locus MLL 0.028 myeloid/lymphoid or mixed-lineage leukemia protein [... DMKN 0.028 dermokine isoform 4 precursor DMKN 0.028 dermokine isoform 5 precursor DMKN 0.028 dermokine isoform 3 precursor DMKN 0.028 dermokine isoform 2 precursor ANKHD1 0.026 ankyrin repeat and KH domain containing 1 isoform 2 ... HOXD11 0.026 homeobox D11 HOXA13 0.026 homeobox A13 CKAP4 0.025 cytoskeleton-associated protein 4 MLL4 0.025 myeloid/lymphoid or mixed-lineage leukemia 4 NPAS3 0.025 neuronal PAS domain protein 3 isoform 2 NPAS3 0.025 neuronal PAS domain protein 3 isoform 1 LOC100289763 0.025 PREDICTED: hypothetical protein XP_002347867 LOC100289681 0.025 PREDICTED: hypothetical protein XP_002343623 TAF5 0.025 TBP-associated factor 5 MBD1 0.025 methyl-CpG binding domain protein 1 isoform 2 MBD1 0.025 methyl-CpG binding domain protein 1 isoform PCM1 [Ho...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
