Guide to the Human Genome
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Name: ANKHD1 Sequence: fasta or formatted (616aa) NCBI GI: 46519151
Description:

ankyrin repeat and KH domain containing 1 isoform 2

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [2542aa] ankyrin repeat and KH domain containing 1 isoform 1
alt prot [627aa] ankyrin repeat and KH domain containing 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.0         86           4
 C cysteine            2.1         13           2
 D aspartate           7.0         43           1
 E glutamate           9.6         59           2
 F phenylalanine       2.1         13           1
 G glycine            10.7         66           5
 H histidine           3.1         19           1
 I isoleucine          2.3         14           1
 K lysine              2.8         17           1
 L leucine            12.2         75           4
 M methionine          2.3         14           1
 N asparagine          3.6         22           1
 P proline             2.8         17           4
 Q glutamine           2.3         14           1
 R arginine            3.2         20           2
 S serine              6.5         40           2
 T threonine           6.0         37           2
 V valine              6.3         39           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and KH domain containing 1 isoform 2 ... 
ANKHD1                0.993   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.940   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.940   ANKHD1-EIF4EBP3 protein 
ANKRD17               0.728   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.728   ankyrin repeat domain protein 17 isoform b 
ANKRD50               0.150   ankyrin repeat domain 50 
ANK3                  0.135   ankyrin 3 isoform 1 
ANK1                  0.133   ankyrin 1 isoform 9 
ANK1                  0.133   ankyrin 1 isoform 1 
ANK1                  0.133   ankyrin 1 isoform 3 
ANK1                  0.133   ankyrin 1 isoform 2 
ANK1                  0.133   ankyrin 1 isoform 4 
ANK2                  0.128   ankyrin 2 isoform 3 
ANK2                  0.124   ankyrin 2 isoform 2 
ANK2                  0.124   ankyrin 2 isoform 1 
ANKRD28               0.122   ankyrin repeat domain 28 
ANKRD44               0.120   ankyrin repeat domain 44 
KIDINS220             0.120   kinase D-interacting substrate of 220 kDa 
RIPK4                 0.113   ankyrin repeat domain 3 
ANKK1                 0.109   ankyrin repeat and kinase domain containing 1 
TANC2                 0.104   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKS6                 0.104   ankyrin repeat and sterile alpha motif domain contai...
ANKRD52               0.102   ankyrin repeat domain 52 
TNKS                  0.100   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TANC1                 0.099   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.099   tetratricopeptide repeat, ankyrin repeat and coiled...
TNKS2                 0.099   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ASB2                  0.097   ankyrin repeat and SOCS box-containing protein 2 [Ho...
DAPK1                 0.086   death-associated protein kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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