HOXD11 16004

Name: HOXD11	Sequence: fasta or formatted (338aa)		NCBI GI: 23510368
Description: homeobox D11		Referenced in: HOX Genes
Composition: Amino acid Percentage Count Longest homopolymer A alanine 14.2 48 13 C cysteine 1.8 6 1 D aspartate 3.3 11 1 E glutamate 5.6 19 2 F phenylalanine 4.7 16 3 G glycine 14.8 50 6 H histidine 0.6 2 1 I isoleucine 1.2 4 1 K lysine 4.7 16 2 L leucine 4.7 16 2 M methionine 1.8 6 1 N asparagine 3.0 10 1 P proline 12.1 41 5 Q glutamine 4.4 15 1 R arginine 6.2 21 2 S serine 6.8 23 3 T threonine 2.1 7 1 V valine 3.0 10 1 W tryptophan 0.6 2 1 Y tyrosine 4.4 15 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 homeobox D11 HOXA11 0.357 homeobox A11 HOXC11 0.301 homeobox C11 HOXA10 0.142 homeobox A10 isoform a HOXD9 0.132 homeobox D9 HOXD8 0.127 homeobox D8 HOXB9 0.121 homeobox B9 HOXB3 0.120 homeobox B3 HOXC10 0.117 homeobox C10 HOXA10 0.117 homeobox A10 isoform b HOXD12 0.114 homeobox D12 HOXA9 0.114 homeobox A9 HOXD10 0.113 homeobox D10 HOXC9 0.108 homeobox C9 HOXA4 0.107 homeobox A4 GBX1 0.107 gastrulation brain homeo box 1 HOXC12 0.107 homeobox C12 HOXD13 0.104 homeobox D13 HOXA13 0.104 homeobox A13 HOXB2 0.101 homeobox B2 HOXC13 0.099 homeobox C13 HOXD3 0.094 homeobox D3 HOXA3 0.094 homeobox A3 isoform a HOXA3 0.094 homeobox A3 isoform a PDX1 0.092 pancreatic and duodenal homeobox 1 HOXB4 0.089 homeobox B4 HOXA5 0.088 homeobox A5 CDX1 0.088 caudal type homeobox 1 HOXB6 0.085 homeobox B6 HOXD4 0.083 homeobox D4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.